Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00068 ATGCATCTTGAGGAATTGAAGGGAGAAGAGGTGGGGGGTGGAGGGGAAGGGAAAGTATATATCGGAAATGGTGTTATTGGCGCGGCTAGTTTTGTCGTATCGGATGCGAAAAGGGCTCTGGTTGGAGCGGGCGCTCGTGCTCTCTTCTACCCCACTCTGCTTTATAATGTCGTCAGGAATAAGGTGCAGGCCGAGTTTCGGTGGTGGGATAAGGTTGATGAGTTCATATTATTAGGTGCTGTTCCCTTTCCTGTTGATGTTCCCCGCCTAAAGGAGCTGGGTGTTCGAGGAGTCATCACATTGAATGAGTCATATGAGACTTTGGTGCCAACCTCACTTTATCACGCTCATGGAATTGACCATCTTGTGATTCCTACTAGAGATTACTGTTTCGCACCTTCATTGCATGACATATGCTCTGCTGTAGACTTCATTCATGAAAATGCGTTGGCTGGACGGGTTACATATGTCCATTGCAAAGCTGGCCGCGGTCGCAGCACAACTGTTGTCATCTGTTACCTGGTCCATCACAAGCTTATGACGCCCAGTGCTGCATATGATTATGTGAAGTCAATTCGACCAAGGGTTCTTCTGGCTTCCTCTCAGTGGCGAGCTGTTCAGGAATACTACCACCTTAGGGTTAGGAAAGCTATGACCTATGCTCCCGCAAGCAACCTAATAATAAAGGCACCTGCAGCAACGGGAGCTTCGCTAGACCTTGTAACATTTGATGACGGTTCAGTAGTTGTGGTAACGGAGTCAGACGTGGAAGGTTATGAGCCCGCTATGGGAAGGGAAATATGGGCAAATGTGAGTTTGGTTTGCCGTGTACGGGTTGTGGGACAGGCAGCATTGGCAAGAATATCTTGCCTTTGGCTGAGATATGGTCGCCACCGGCAGGCTTCCACCGGCAATCATTTGGGAGGCATCAGTGTTGATATCCATGTCTTCTGA 954 0.4885 MHLEELKGEEVGGGGEGKVYIGNGVIGAASFVVSDAKRALVGAGARALFYPTLLYNVVRNKVQAEFRWWDKVDEFILLGAVPFPVDVPRLKELGVRGVITLNESYETLVPTSLYHAHGIDHLVIPTRDYCFAPSLHDICSAVDFIHENALAGRVTYVHCKAGRGRSTTVVICYLVHHKLMTPSAAYDYVKSIRPRVLLASSQWRAVQEYYHLRVRKAMTYAPASNLIIKAPAATGASLDLVTFDDGSVVVVTESDVEGYEPAMGREIWANVSLVCRVRVVGQAALARISCLWLRYGRHRQASTGNHLGGISVDIHVF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00068 317 Pfam Dual specificity phosphatase, catalytic domain 90 210 IPR000340 GO:0008138|GO:0016311
Pral4686g00068 317 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 28 293 - -
Pral4686g00068 317 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 61 212 IPR029021 -
Pral4686g00068 317 CDD PTPMT1 68 210 IPR044596 GO:0004721
Pral4686g00068 317 Gene3D Protein tyrosine phosphatase superfamily 68 216 IPR029021 -
Pral4686g00068 317 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Pral4686g00068 317 FunFam Dual specificity phosphatase domain protein 68 215 - -
Pral4686g00068 317 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
Pral4686g00068 317 SMART dsp_5 71 212 IPR020422 GO:0006470|GO:0008138
Pral4686g00068 317 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00068 Pral-Chr4686 346442 350373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00068 25 317 Protein tyrosine phosphatase (PTP) family AT2G35680 61.688 9.58e-132 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00068 - - zju:107430324 459.144