Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00058 ATGCAAACCCACGACTCCTTGCCCGGATCCACTAGCCACGACTCCAATTTTGTCTTTTTGGAATCCATTCGCCGTCACTTGCTCGGTGAGTCCAACGCTGCTCCGGCTGCTATATCCAGTAACACCCCTGTTTACTCTCGGAGCTCCAGTTTCAACAGAATGGACGCGTGTCTGAATGATCACTGGGGCGAATTGCCTCTCAGACAGGACGATCCCGAAGACATGCTACTCTACGGTGTACTCCGGGACGCAGTCCGAGTGGGATGGGCCCCAACCATGAACGTCAGCTCACCAGAAAGCGTCTGCTCGGGTTTGCAATCCGCCATTACAGTGAAACCAGAGCCGGCTGTGGTAGAGACGGCGGCGGCCCCACAAGAGAAGGCGAAGGAGAAGGCAAGGCATTACCGAGGCGTGCGTAAGCGGCCGTGGGGGAAGTTCGCGGCGGAGATACGAGACCCGGCTAAGAATGGAGCTCGGGTATGGCTGGGTACATTTGAGACGGCAGAGGATGCCGCTCTGGCATATGACCGAGCCGCTTACAGGATGCGGGGCTCGCGGGCGCTTCTTAATTTTCCGCTTAGGGTGAACTCGGGGGAACCGGAGCCCGTGAGAGTGAGGGCGAAGCGGTCTTTATCGGAGGCAACGTCGTCGGGTTCGGAGACTGGGAAGCGAAAAGAGAAGGCGGCGAGAAGGGGAGTTGGCAGCGAAGCGGCATCTTGTACGAATGATTTCATGCCCACACGTCCACGTGGCTCTGATTTCTCCTTCTGTGAGTTACGTTAG 783 0.5747 MQTHDSLPGSTSHDSNFVFLESIRRHLLGESNAAPAAISSNTPVYSRSSSFNRMDACLNDHWGELPLRQDDPEDMLLYGVLRDAVRVGWAPTMNVSSPESVCSGLQSAITVKPEPAVVETAAAPQEKAKEKARHYRGVRKRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPEPVRVRAKRSLSEATSSGSETGKRKEKAARRGVGSEAASCTNDFMPTRPRGSDFSFCELR 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00058 260 ProSiteProfiles AP2/ERF domain profile. 134 192 IPR001471 GO:0003700|GO:0006355
Pral4686g00058 260 Pfam AP2 domain 134 184 IPR001471 GO:0003700|GO:0006355
Pral4686g00058 260 MobiDBLite consensus disorder prediction 201 260 - -
Pral4686g00058 260 CDD AP2 134 192 IPR001471 GO:0003700|GO:0006355
Pral4686g00058 260 PRINTS Ethylene responsive element binding protein signature 135 146 IPR001471 GO:0003700|GO:0006355
Pral4686g00058 260 PRINTS Ethylene responsive element binding protein signature 158 174 IPR001471 GO:0003700|GO:0006355
Pral4686g00058 260 SUPERFAMILY DNA-binding domain 134 194 IPR016177 GO:0003677
Pral4686g00058 260 PANTHER DNA-BINDING DOMAIN 110 220 IPR044808 GO:0003700|GO:0009873
Pral4686g00058 260 Gene3D AP2/ERF domain 133 195 IPR036955 GO:0003700|GO:0006355
Pral4686g00058 260 SMART rav1_2 134 198 IPR001471 GO:0003700|GO:0006355
Pral4686g00058 260 FunFam Ethylene-responsive transcription factor 2 133 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00058 Pral-Chr4686 311347 312402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00058 15 233 AP2-EREBP Transcription Factor Family AT4G17500 52.459 1.74e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4686g00058 AP2 4.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00058 K09286 - gmx:100819649 263.077