Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00057 ATGGCAGTGCCCAGCATCTTCTTCATCCTCCTCCTCCTGGCTCCACTTGATTTGGCTCTTGGAAACGTGACCTTGGGCTCAACACTCTCCACCAATGATCAAACCAATCCTTCCTGGCTCTCACCTTCAGGAGAATTCGCTTTTGGATTTCGCCCAATCAATAACACCAATCTCTTTTTGCTTGCCATTTGGTTCAACAACATACCTGACAAAACCATAGTCTGGTATGCCAACATGGCGAGTCCAACTGCACCATCAGGATCGCATGTTCACCTCACACGAACAGGTCTCAGACTCACCAATCCTCAAGGTCAAGCTCTATGGACTGCTACATCACAAGAAGATGTGTCCCATGGAGCTATGATGGACACAGGAAACTTTGTTTTGGTATCCTCAAGTTCTTCCTATTTGTGGCAAAGTTTCAACAATCCCACTGACACACTGTTGCCAAACCAAACTTTGGGTCTCAACGGTAATTTATCTTCTCGCTTAACACAAACGAATTACACAAAGGGAAAGTTTGAGCTTTATTTTGATAATACCAATCTCTTGTTAAGTCAGACGGGATGGCCAACTGAATCTCGTTACACTAGTTACTTTAATGTCGAGACGAGTTCAGCAACCAATGTTAATGACTCTGCTTTACGGCTAGTCTTTGATAGATCAGATGTTTATGTAGAGACCAAAGGTGGATATCATATACCCCTTGGGTCTGCATGGTCTGACTCAACTCTGGATGTGAACAGATTTTATTACAGGGCCACACTTGATTATTATGGAGTGTTTACGTTATATTCTTACCAGAAGGGATCTGGCAGCAACCAAGTTTGGTCCATTGTGGACTATGTTCCGGAAGACATTTGCGGGAGCATACGAAGTGAATATGGGGGTGGTGCTTGTGGGTATAACAGCTATTGTTTAATGGAAAATCAGAGGCCAACCTGTAAATGCCTAGATGGGTACTCCCTGGTTGATCCAAACAACTTGTTTGGAGGATGCCAACCTGATGTCTCACTTGGTTGCGGGGCTGATGATGTAGAATCAAAAACCAATCCAGAAGAGGTGTATGAGATGAAGACTTTGCAAAATGTAGATTGGCCTTTGGGAGACTATGAAAGATTGTACAATTATACCCAAGATGAATGCCAAACATCTTGCTGGTATGATTGTAACTGTGCTGTTGCCATTTTTGACAATAATGCCACTTGTTGGAAGAAAAGACTACCCCTTTCTAATGGAAGAGGAAATGTGGATAGAGGTCAAACGGCACTTATCAAAACTAGAATTTTACCACGGAGCAATCTTCACCAAGTTGAGAAAATAGAACCGGCTCTTTTAGGTTCGCTTATTGGTTCTCTGGTCACTAACACCTTGCTTGTCGCCATTGTGGTTATGATTATTCGGTCAAGGCCAAAAAAGGTTGTCCAAGTTTCAAGTGCTCTTGATATAAATTTGCACTCTTTCACATATGAAGCATTGAAAGAGGCAACTCTTGAATTCAGTGAAGAGTTAGGAAGGGGTTCCTTTGGCATTGTGTACAAAGGCACCCTTAAATCAGGAACCAATAATAATAACGTTGTTGCGGTGAAGAGGTTAGACAGATTGGCTCAAGAACGAGAGAAGGAGTTTAGGACAGAGCTGAGTGCTATTGGAAAAACATGCCACAAAAATTTGGTACGGTTAATTGGTTTTTGTGATGAGGGAGTCCACAGACTTCTGGTGTATGAGTTCATGAGCAATGGAACACTCGCAGACATCCTTTTTGGTGGACTTAAACCCATTTGGAATTTAAGGGTCAACTTTGCTTTGGGAATCGCAAGAGGATTGCTTTACTTACATGAAGAATGTGACACCCCCATCATTCATTGTGATATAAAGCCTCAGAATATACTGATTGATGAACACTTCATACCAAAAATCTCAGACTTTGGGTTGGCCAAGTTGTTACACTCCAATCAAAGCCGAACTCATACAATGATAAGAGGAACAAGAGGGTATGTAGCACCAGAATGGTTCAAGAGAGTTCCAGTGACATCTAAAGTGGATGTTTATAGCTACGGTGTGATGCTGTTAGAGATAATTTGCTGCAGAAGAAATGTGATGATGGACATGGATGAAGGGGAGGAAGAAAAGGCAGTGCTAATAGACTGGGCCTGTGATTGCTACGCCGAAGGGAGAATAGATATTTTGGTAGAGAATGATCAGGAAGCCATAGCTGACATAGGGAGGTTGAAGAAGTGGGTGATGATAGCAATATGGTGCGTTCAAGAGAAGCATGAAGCACGGCCCACCATGAAGACTGTAATGCAAATGTTGGAAGGCCTTATTGAAGTGCCAAATCCTCCATTACCTTCCTCCTTCACCTCAACCCTGATTTGA 2379 0.4262 MAVPSIFFILLLLAPLDLALGNVTLGSTLSTNDQTNPSWLSPSGEFAFGFRPINNTNLFLLAIWFNNIPDKTIVWYANMASPTAPSGSHVHLTRTGLRLTNPQGQALWTATSQEDVSHGAMMDTGNFVLVSSSSSYLWQSFNNPTDTLLPNQTLGLNGNLSSRLTQTNYTKGKFELYFDNTNLLLSQTGWPTESRYTSYFNVETSSATNVNDSALRLVFDRSDVYVETKGGYHIPLGSAWSDSTLDVNRFYYRATLDYYGVFTLYSYQKGSGSNQVWSIVDYVPEDICGSIRSEYGGGACGYNSYCLMENQRPTCKCLDGYSLVDPNNLFGGCQPDVSLGCGADDVESKTNPEEVYEMKTLQNVDWPLGDYERLYNYTQDECQTSCWYDCNCAVAIFDNNATCWKKRLPLSNGRGNVDRGQTALIKTRILPRSNLHQVEKIEPALLGSLIGSLVTNTLLVAIVVMIIRSRPKKVVQVSSALDINLHSFTYEALKEATLEFSEELGRGSFGIVYKGTLKSGTNNNNVVAVKRLDRLAQEREKEFRTELSAIGKTCHKNLVRLIGFCDEGVHRLLVYEFMSNGTLADILFGGLKPIWNLRVNFALGIARGLLYLHEECDTPIIHCDIKPQNILIDEHFIPKISDFGLAKLLHSNQSRTHTMIRGTRGYVAPEWFKRVPVTSKVDVYSYGVMLLEIICCRRNVMMDMDEGEEEKAVLIDWACDCYAEGRIDILVENDQEAIADIGRLKKWVMIAIWCVQEKHEARPTMKTVMQMLEGLIEVPNPPLPSSFTSTLI 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00057 792 SMART blect_4 26 144 IPR001480 -
Pral4686g00057 792 Gene3D Phosphorylase Kinase; domain 1 462 577 - -
Pral4686g00057 792 SMART serkin_6 498 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4686g00057 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 780 - -
Pral4686g00057 792 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 31 784 - -
Pral4686g00057 792 Gene3D Transferase(Phosphotransferase) domain 1 578 780 - -
Pral4686g00057 792 CDD STKc_IRAK 504 775 - -
Pral4686g00057 792 PIRSF SRK 1 791 IPR024171 GO:0004674
Pral4686g00057 792 Pfam D-mannose binding lectin 72 159 IPR001480 -
Pral4686g00057 792 SUPERFAMILY Protein kinase-like (PK-like) 484 773 IPR011009 -
Pral4686g00057 792 ProSitePatterns Protein kinases ATP-binding region signature. 504 530 IPR017441 GO:0005524
Pral4686g00057 792 ProSiteProfiles Protein kinase domain profile. 498 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4686g00057 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 18 142 - -
Pral4686g00057 792 Pfam Protein kinase domain 499 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4686g00057 792 FunFam S-receptor-like serine/threonine-protein kinase 468 577 - -
Pral4686g00057 792 ProSiteProfiles Bulb-type lectin domain profile. 20 142 IPR001480 -
Pral4686g00057 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Pral4686g00057 792 Gene3D - 22 143 IPR036426 -
Pral4686g00057 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 160 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00057 Pral-Chr4686 304611 307258 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00057 447 778 Receptor kinase-like Gene Family AT1G56120 40.469 2.15e-71 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral4686g00057 Pkinase 8.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00057 - - lja:Lj2g3v1989170.1 933.71