Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00056 ATGGCCATACCCAATATCTTCACCGTCCTTCTCTTGCTTCCTCTTCATTTGGCTTTTGCAAACGTCACTTTGAATTCAACTCTCTACGCCAGTGATCATAACTCTTCATGGCTCTCATCCTCCAAAGAATTTGCTTTTGGATTTCATCCAATCAACAACAGCACAAGGCTCTTCTTGCTTGCCATCTGGTTCGACAAAATACCTGCCAAGACCATTGTCTGGAGTGCAGACATCGCAGATCCAGTACCACTGGGATCGAGGGTTCAGCTCACATCAACGGGTCTCACACTTACTAACCCCCGAGGTCAAGTGATGTGGGCAATCGAACCAGAAGAAGATGTGTCCTACGGAGCAATGCTTGATACCGGAAATTTTGTTCTGGCATCCTCTAGTTCTTATTTGTGGCAAAGTTTTGACAGTCCCACCGACACGCTCTTACCTGCACAAACTTTGGATGTGAACAGTAAGTTATCTTCTCGATTGTCGTCAGTCAATTACACAAAGGGAAGATTTGAGCTTTATTTTGACAATGGAAATCTCTCCTTGAGTCAAATTGGGTGGCCATCTGAGTTTCATTATGACAAATATCTGAGTATTAGCACGAGTTCTAATGACTCTGCCTCACAACTAGTCTTCAATTCGTCGGGATATATTTATGTGAAGACAAAGAGTGGAGATCAAATAGCTCTTGGGTTGAGTAATTCCAGTCTTTCTGTTAGAAGATATTATTACAGGGCTACACTTGATCCTTATGGAGTCTTCTCGTTGTATTCCCATCCTAAGGAACCCAACGGAGATCAAGGTTGGTCAATTGAGGCGTACGTTCCTGATAACATTTGTACTGCAATATTTAGTGATATGGGTAGTGGTTGTTGTGGCCATAATAGCTACTGCTCTTGGGATGACAACATCAAGAGGCCAAATTGTTCGTGTCCAAAAGGATATTTCTTGGCAGATCCAAACGACAATTTCGGAGGATGCCAACCAGGTTTCTCCCTTGGTTGTGGAGCTGATGATACGCAATCACGAGAAAATCCAGAAGAGGTATATCATATGGAGCCTTTGCAAAGTGTGAATTGGCCTCTGGGAGATTATGAAAGGTTGATCAATTATACCCAAGATGAATGTATAAAATCTTGCTTGCATGATTGTAATTGTGCAGTTGCTATCTCTAACACTGGAAAGGATTGTTGGAAGAAAAGATTACCTGTTTCTAACGGAAGATTATCTACAAGTGCGGGTGGAACAACAGCACTCTTGAAAATAAGAACTCAACAACTGGGTAATCTTAATCCTTCTCGGCAAAAGGAATATCGGGTCCAACCCGCTTTGTTAGGGTCCCTTATTGGCTCCCTTGTTCTTAGTACCCTATTGGCAGCAGCTTTGGTTTCGATTATTCTCTTAAAGCCCAAAAAGGCCACTCGTGTTACAAGCCTTGTCGAAACAAATATGCATTCTTTCTCATATGAAGTACTGAAGGAGGCAACAAATGAGTTCAACGAAGAAGTAGGAAGAGGTTCCTTTGGCATTGTGTACAAAGGCATCCTCAGATCAGTAACAAATACTGTTGTTGCAGTGAAAAGATTGGACAGATTGGCTCAAGAACGAGAGAAGGAATTTAGGAATGAGTTGAGCGCTATTGGAAACACATGCCACAAAAATCTGGTTCGGCTGATTGGGTTCTGTGACGAGGGAGATCATAGACTTCTGGTGTATGAGTTCATGAGCAATGGTACTCTCGCCGATATTCTCTTTGGAAAATCCAAACCCGACTGGAATTTAAGGGTTAACTTTGCTTTGGGAATTGCAAGAGGTTTGCTTTACTTACATGAAGAGTGCGACACTCCTGTTATCCATTGCGATATTAAACCTCAAAATATACTGATAGATGCACATCTGAGGGCAAAAATCTCAGATTTTGGGTTAGCCAAGTTGTTGTGTTTTAATCAGAGTCGAACCCAGACAATGATAAGAGGAACTAGAGGATATGTAGCACCAGAATGGTTCAAAAACGTTCCAATAACTCCCAAGGTTGATGTCTATAGCTATGGCGTGATGCTGCTGGAGATAATTTGTTGCAGAAGAAGTGTGGAAATGGATATGGATAAAGGGGAGGAAAGAGAGGCAATACTGACAGACTGGGCTTATGATTGCTATATGGATGGAAGAATAGACATTCTCGTAGAGAACAATGAGGAGGCCATGGCCGATAGAAGCTTGAAGAAGTGGGTGATGATAGCGATGTTGTGTGTCCAAGAGAATCCTGAAGTGAGGCCTACCATGAAGACAGTGACGCAAATGTTAGAAGGCCTCGTTGACATTCCAAATCCACCACCGCCTTCGTTCTACACCCATGTTTGA 2361 0.4252 MAIPNIFTVLLLLPLHLAFANVTLNSTLYASDHNSSWLSSSKEFAFGFHPINNSTRLFLLAIWFDKIPAKTIVWSADIADPVPLGSRVQLTSTGLTLTNPRGQVMWAIEPEEDVSYGAMLDTGNFVLASSSSYLWQSFDSPTDTLLPAQTLDVNSKLSSRLSSVNYTKGRFELYFDNGNLSLSQIGWPSEFHYDKYLSISTSSNDSASQLVFNSSGYIYVKTKSGDQIALGLSNSSLSVRRYYYRATLDPYGVFSLYSHPKEPNGDQGWSIEAYVPDNICTAIFSDMGSGCCGHNSYCSWDDNIKRPNCSCPKGYFLADPNDNFGGCQPGFSLGCGADDTQSRENPEEVYHMEPLQSVNWPLGDYERLINYTQDECIKSCLHDCNCAVAISNTGKDCWKKRLPVSNGRLSTSAGGTTALLKIRTQQLGNLNPSRQKEYRVQPALLGSLIGSLVLSTLLAAALVSIILLKPKKATRVTSLVETNMHSFSYEVLKEATNEFNEEVGRGSFGIVYKGILRSVTNTVVAVKRLDRLAQEREKEFRNELSAIGNTCHKNLVRLIGFCDEGDHRLLVYEFMSNGTLADILFGKSKPDWNLRVNFALGIARGLLYLHEECDTPVIHCDIKPQNILIDAHLRAKISDFGLAKLLCFNQSRTQTMIRGTRGYVAPEWFKNVPITPKVDVYSYGVMLLEIICCRRSVEMDMDKGEEREAILTDWAYDCYMDGRIDILVENNEEAMADRSLKKWVMIAMLCVQENPEVRPTMKTVTQMLEGLVDIPNPPPPSFYTHV 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00056 786 FunFam S-receptor-like serine/threonine-protein kinase 468 574 - -
Pral4686g00056 786 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 776 - -
Pral4686g00056 786 FunFam Serine/threonine-protein kinase 142 283 - -
Pral4686g00056 786 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 179 IPR036426 -
Pral4686g00056 786 SMART blect_4 25 141 IPR001480 -
Pral4686g00056 786 ProSiteProfiles Protein kinase domain profile. 497 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4686g00056 786 Gene3D - 21 140 IPR036426 -
Pral4686g00056 786 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 27 780 - -
Pral4686g00056 786 Pfam Protein kinase domain 499 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4686g00056 786 Gene3D - 141 284 IPR036426 -
Pral4686g00056 786 Gene3D Transferase(Phosphotransferase) domain 1 575 775 - -
Pral4686g00056 786 SMART serkin_6 497 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4686g00056 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Pral4686g00056 786 ProSiteProfiles Bulb-type lectin domain profile. 19 140 IPR001480 -
Pral4686g00056 786 Gene3D Phosphorylase Kinase; domain 1 463 574 - -
Pral4686g00056 786 Pfam D-mannose binding lectin 71 157 IPR001480 -
Pral4686g00056 786 CDD STKc_IRAK 503 771 - -
Pral4686g00056 786 PIRSF SRK 1 786 IPR024171 GO:0004674
Pral4686g00056 786 SUPERFAMILY Protein kinase-like (PK-like) 475 769 IPR011009 -
Pral4686g00056 786 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 17 139 - -
Pral4686g00056 786 ProSitePatterns Protein kinases ATP-binding region signature. 503 527 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00056 Pral-Chr4686 289400 292251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00056 444 778 Receptor kinase-like Gene Family AT3G53380 36.812 7.82e-66 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral4686g00056 Pkinase 1.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00056 - - gmx:100775269 885.945