Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00055 ATGGCTATTCCCAGTATCTTCTTCTTCGCCCTTTTCTTGCTTCAACATCATCTGGCTTTTGGACGCGTTGATTTGAACGCAAATTTCTCCACCAACGATCAAAATGCTTCATGGCTCTCCTCTTCTCAGGAATTCGCTTTTGGATTTCGCCCAATCAACAACACAAATCTCTTTTTGCTTGCCATCTGGTTTGACAAAATACCTGACAAAACCATTGTCTGGAATGCAGACATGTCAAATCCAGCAGTACCATCAGGATCGCGTGTTCAGCTCACACAAAGTGGTCTTAATCTCACTAACCCCCAAGGTCAATCTCTGTGGACAACTGAACTGCAACAAGATGTGTTCTATGCAGAAATGCGTGACGATGGAAATTTTGTGCTGGCATCCTCAAATTCTTCTTATTTGTGGCAAAGTTTCAACAATCCTACGGACACACTCTTACCCTCACAAACTTTGGATATGAACAGTAAGTTATTTTCTCGATTGTCACCAACCAATTACACTAAGGGAAGGTTCGAGCTTTATTTTGATAATGGCAATCTCTCCTTAGCTCAGATTGGGTGGCCATCGGAATCTCTTTACACCAAGTATTTTGATATCAGCACGAGTTCCAATCAATCTGCTTCACAACTACGCTTCAATTCATCAGTAATCGGAGGTCAAAGAGCCATTGGATTGAGTAGTTCAGATCTTGATGTTAGCAGATATTATTACAGGGCTACGCTTGATTACTATGGAGTTTTTTCATTGTATTCCCATCCGAGGGGGTCAAATGACGATCAGATTTGGTCAAATGTGGGGTATGTTCCTGACAACATTTGTAATGCAATATATAGTGATATGGGTAGTGGTTCGTGCGGCTACAACAGCTACTGCTCTTGGGATAACAGCACCAAGAGGCCAACTTGTATGTGTCCAGAAGGATATTCATGGGTAGATTCAAACGACAAATTTGGAGGATGCCAACCTGCTTTCTCCTTTGGCTGTGGAGCTGATGATGCGCGATCACGAGAAAATCCAGAAAAGGTATATGAGATGAAGCCTCTGCCAAATGTGAATTTTCCTCTTGGAGATTATGAAAGGTTGAACAATTATACTCGGGATGAATGTGAAAAATCTTGCTTGTATGATTGTAATTGTGCCGTTGTTATCTCTAACGCTGCAAAGGATTGTTGGAAGAAAAGATTGCCCCTTTCTAACGGAAGAATAGATCTGATGGAGGGTTTAACAACAACACTCTTGAAAATAAGAGTTCAGCCTTTGAAAAAGAAAGATCGGGTCCAACCTGCTCTATTAGGGTCGCTAATTGGCTCCCTTGTTATTATTGCTCTGTTGGCAGCCACAGTTGTATCCATTATTCTGTTAAAGCCCTATAAGGTTGCACGTCGAGTTTCAAGTTTTGTTGAAACAAATATGCACTCTTTCACATATCAAGCACTGAAGGAGGCAACACATGGGTTCAGTGAAGATTTAGGAAGGGGTTCATTTGGCATTGTGTACAAAGGCACCCTCAACTCAATAACGAAAACTACTGTTGTTGCGGTGAAGAGATTGGATAGAATAGCTCCGGAACGTGAGAGGGAGTTTAGGAATGAGTTGAATGCCATTGGAAGAACATGCCACAGAAATTTGGTCAAGCTGATCGGGTTCTGTGATGAAGGAGTTCATAGACTTTTGGTATACGAGTTTATGAGCAACGGTGCACTTGCAGACATCCTTTTCCGGCAACCCAAACCTGTATGGAATTTGAGGGTTAGATTTGCTTTAGGAATTGCAAGAGGGCTGCTTTACTTACACGAAGAGTGTGAGACCCCCACCATTCACTGTGATATAAAACCCCAAAATATTCTCATAGATGAGCATTTCATGCCAAAAATCTCAGATTTCGGGTTGGCCAAGTTGTTGTATTCTAATAAGAGCAGAACCCACACAATGATAAGAGGAACCAGAGGATATGTAGCACCAGAATGGTTCAAGAGTGTTCCAGTGACGGCTAAGGTGGATGTTTATAGCTATGGCGTGATGCTGCTAGAGATAATTTGTTGCAGAAGAAGCTTGGAGATGGATCGGGATGAAATGGAGGAAGGCCAGGCAATACTAATAGATTGGGTTTACGATTGCTATATGGAGGGAAGAATTGACGTCCTGGTAGAGAATGATAAGGAGGCCATTGCGGACATGGGGAGATTAAAGAAATGGGTGATGATAGCAATATGGTGCATTCAGGAGAATCCAGAAACAAGGCCTAGCATGAAGAATGTGATGCAAATGTTGGAAGGCCTTATCGAGGTTCCAAGTCCTCCGTTTCCTTCGTCCTTCTCCTCGAAAGTTCACGGGTCGCAGCCATGGACATAG 2358 0.4254 MAIPSIFFFALFLLQHHLAFGRVDLNANFSTNDQNASWLSSSQEFAFGFRPINNTNLFLLAIWFDKIPDKTIVWNADMSNPAVPSGSRVQLTQSGLNLTNPQGQSLWTTELQQDVFYAEMRDDGNFVLASSNSSYLWQSFNNPTDTLLPSQTLDMNSKLFSRLSPTNYTKGRFELYFDNGNLSLAQIGWPSESLYTKYFDISTSSNQSASQLRFNSSVIGGQRAIGLSSSDLDVSRYYYRATLDYYGVFSLYSHPRGSNDDQIWSNVGYVPDNICNAIYSDMGSGSCGYNSYCSWDNSTKRPTCMCPEGYSWVDSNDKFGGCQPAFSFGCGADDARSRENPEKVYEMKPLPNVNFPLGDYERLNNYTRDECEKSCLYDCNCAVVISNAAKDCWKKRLPLSNGRIDLMEGLTTTLLKIRVQPLKKKDRVQPALLGSLIGSLVIIALLAATVVSIILLKPYKVARRVSSFVETNMHSFTYQALKEATHGFSEDLGRGSFGIVYKGTLNSITKTTVVAVKRLDRIAPEREREFRNELNAIGRTCHRNLVKLIGFCDEGVHRLLVYEFMSNGALADILFRQPKPVWNLRVRFALGIARGLLYLHEECETPTIHCDIKPQNILIDEHFMPKISDFGLAKLLYSNKSRTHTMIRGTRGYVAPEWFKSVPVTAKVDVYSYGVMLLEIICCRRSLEMDRDEMEEGQAILIDWVYDCYMEGRIDVLVENDKEAIADMGRLKKWVMIAIWCIQENPETRPSMKNVMQMLEGLIEVPSPPFPSSFSSKVHGSQPWT 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00055 785 ProSiteProfiles Bulb-type lectin domain profile. 23 141 IPR001480 -
Pral4686g00055 785 Gene3D Phosphorylase Kinase; domain 1 454 564 - -
Pral4686g00055 785 SMART serkin_6 486 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4686g00055 785 ProSiteProfiles Protein kinase domain profile. 486 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4686g00055 785 FunFam S-receptor-like serine/threonine-protein kinase 457 564 - -
Pral4686g00055 785 Pfam Protein kinase domain 490 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4686g00055 785 CDD STKc_IRAK 492 762 - -
Pral4686g00055 785 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 18 141 - -
Pral4686g00055 785 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 30 771 - -
Pral4686g00055 785 Pfam D-mannose binding lectin 71 158 IPR001480 -
Pral4686g00055 785 Gene3D - 33 146 - -
Pral4686g00055 785 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 565 767 - -
Pral4686g00055 785 Gene3D Transferase(Phosphotransferase) domain 1 565 771 - -
Pral4686g00055 785 ProSitePatterns Protein kinases ATP-binding region signature. 492 517 IPR017441 GO:0005524
Pral4686g00055 785 PIRSF SRK 1 784 IPR024171 GO:0004674
Pral4686g00055 785 SMART blect_4 27 143 IPR001480 -
Pral4686g00055 785 SUPERFAMILY Protein kinase-like (PK-like) 466 760 IPR011009 -
Pral4686g00055 785 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 161 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00055 Pral-Chr4686 278943 281300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00055 472 761 Receptor kinase-like Gene Family AT1G60800 41.077 3.39e-68 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral4686g00055 Pkinase 4.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00055 - - gmx:100775269 848.966