Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00054 ATGTCTATTCCTAGTATCTACTTCTTCGCCTTCTTCTTGCTTCGACTTCATTTGGCTTTTGGAATCGTTGATGTGAACACCACTCTCTCCGCCAACGATCAAAATGATCGATGGCTCTCCTCTTCTCAGGAATTCGCTTTCGGATTTCGCCGAATCAACAACACAAATCTCTTTTTACTTGCCATCTGGTACGACAAAATACCTGACAAAACCGTTGTCTGGAATGCAAACATGTCCAATCCAGCAGTACCATCAGGATCGCGAGTTCAGCTCACACGAACTGGTCTTAGTCTCACTAACCCCCAAGGTCAAGCTATATGGAATTCTACACCACAAGAAGATGTGTCCCATGCAGAAATGCGTGATGATGGAAATTTTGTTCTGGTGGCATCCTCCAATTCTTCTCATTTGTGGGAAAGTTTCAAAAATCCCACCGATACACTGTTGCCAAACCAAACTCTCGGTCTTGATGGCAAGTTGTCTTCTCGCTTGGCACAATCAAATTATACAAAGGGAAGGTTTGAGCTTTATTTCGAAGGTGTCAATCTCGCGTTAAGTCAGATTGGATGGCCAACTGAATTTCGTTACAAAAAATATTACGAATTTGATGCAAATTTAAATGACTCTGTGTCAGGACTAGTCTTTAATTCTGCTGGAAATGTCTCTGTAGGTCAAAGACCTCTATGGGACGGCTTAGATAATGATGTAAATAGATATTATTACAGGGCTACACTTGATTATTATGGAGTCTTCACGTTGTATTCCTATCCAAGGAATCCCAGCTATGAGAACCAAGTTTGGTCATTCGTGAAGTATGTTCCTGATGATGGGAACGTTTGCACTGTACTCTTTGGTGATCTGGGTAGTGGTTGTTGTGGCTACAATAGCTACTGTGTTTGGAATTCGAATGACGGTAGGCCAACTTGTGAGTGCCCTGATTGGTATTCCCTAGTGGATCCGAACGATGAATTTGGAGGATGCGAACCTAATCTCCCCTTTGGTTGTGCCGCTGATGATGAAGAATCAAAAGCCAATCCGGAAAAGGTGTATGAGATGAAGATCTTGCAAAAAAATGTGAATTGGCCTCTCGGAGATTATGAAAGGCTGCTCAATTACACAGAGGACGAATGTAGCAGATCTTGCTTGTATGATTGTAACTGTGCAGTTGCTATTTTTAACAATCATGGTGATTGTTGGAAGAAAAGACTACCACTTTCTAACGGAAGATATCTTACTAGTGCTGATGGAACTACAGTCTTGATGAAAATAAGAATTCGACCATTGGGTATGAAAAAGGAAGATCGGGTCTATCACGCTCTTTTAGGATTGTTTATTGGCTTCCTTGTCATAAATACTTTCTTTGTAGCCAAAATGGTTTCGATTGTTCTCTTAAAGTCAAAAAAGGATAATGCTCAGGTTTCAAGTCCTGTAGAAACAAACATGCACTCTTTCACATTTGAAGCACTGAAGGAGGCAACGAGTGGGTTTAATGAAGAAGTAGGAAGGGGTTCATTTGGCACTGTGTACAAAGGCACCCTCAACTCAAGAACTAATGCTGCTGTTGCGGTGAAGAGATTGGATAGAATAGCTCAAGAACGTGAGAAGGAATTTAGGACTGAGTTGAGTGCTATTGGAAAAACATGCCACAGAAATTTGGTTAGGCTGATTGGGTTCTGTGATGAGGGAGTTCATAGACTTCTGGTATACGAGTTCATGAGCAATGGTACACTTGCAGACATCCTTTTCAGGCAGCCCAAACCTAAATGGAATTTAAGGGTTAGCCTTGCTTTGGGAATTGCAAGAGGGCTACTTTACTTACACGAAGAGTGCGAGACTCCCATCATTCACTGTGATATAAAACCCCAAAATATTCTCATAGATGAGAATTTCATGCCAAAAATCTCAGATTTTGGGTTGGCCAAGTTGTTGTACTCTAATAAGAGCAGAACCCACACAATGATAAGAGGAACCAGAGGATATGTAGCACCGGAATGGTTCAAGAGTATTCCGGTGACGGCTAAGGTGGATGTTTATAGCTATGGCGTGATGCTGCTAGAGATAATTTGTTGCAGAAGAAGCTTGGAGATGGATCTGGATAAAGTGGGGGAAGACAAGGCGATACTGACAGATTGGGCTTATGATTGCTATATGGAGGGAAGAATTGACATTCTGGTACAGAGTGACGAGGAGGCCATTGCTGATATAGGGAGGTTGAAGAAATGGGTGATGATAGCAATATGGTGCATTCAAGAGAATCCAGAAATAAGGCCTACCATGAAGACTGTGATGCAAATGTTGGAAGGCCTCATTCAAGTTCCAAGTCCTCCATTACCTTCGTCCTTTTACTCGACAGTTCGCGGGTCGCAGCCATGGAAATAG 2379 0.4212 MSIPSIYFFAFFLLRLHLAFGIVDVNTTLSANDQNDRWLSSSQEFAFGFRRINNTNLFLLAIWYDKIPDKTVVWNANMSNPAVPSGSRVQLTRTGLSLTNPQGQAIWNSTPQEDVSHAEMRDDGNFVLVASSNSSHLWESFKNPTDTLLPNQTLGLDGKLSSRLAQSNYTKGRFELYFEGVNLALSQIGWPTEFRYKKYYEFDANLNDSVSGLVFNSAGNVSVGQRPLWDGLDNDVNRYYYRATLDYYGVFTLYSYPRNPSYENQVWSFVKYVPDDGNVCTVLFGDLGSGCCGYNSYCVWNSNDGRPTCECPDWYSLVDPNDEFGGCEPNLPFGCAADDEESKANPEKVYEMKILQKNVNWPLGDYERLLNYTEDECSRSCLYDCNCAVAIFNNHGDCWKKRLPLSNGRYLTSADGTTVLMKIRIRPLGMKKEDRVYHALLGLFIGFLVINTFFVAKMVSIVLLKSKKDNAQVSSPVETNMHSFTFEALKEATSGFNEEVGRGSFGTVYKGTLNSRTNAAVAVKRLDRIAQEREKEFRTELSAIGKTCHRNLVRLIGFCDEGVHRLLVYEFMSNGTLADILFRQPKPKWNLRVSLALGIARGLLYLHEECETPIIHCDIKPQNILIDENFMPKISDFGLAKLLYSNKSRTHTMIRGTRGYVAPEWFKSIPVTAKVDVYSYGVMLLEIICCRRSLEMDLDKVGEDKAILTDWAYDCYMEGRIDILVQSDEEAIADIGRLKKWVMIAIWCIQENPEIRPTMKTVMQMLEGLIQVPSPPLPSSFYSTVRGSQPWK 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00054 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 161 IPR036426 -
Pral4686g00054 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 19 142 - -
Pral4686g00054 792 ProSitePatterns Protein kinases ATP-binding region signature. 500 524 IPR017441 GO:0005524
Pral4686g00054 792 Gene3D Transferase(Phosphotransferase) domain 1 572 774 - -
Pral4686g00054 792 SUPERFAMILY Protein kinase-like (PK-like) 472 767 IPR011009 -
Pral4686g00054 792 CDD B_lectin 35 144 IPR001480 -
Pral4686g00054 792 SMART blect_4 26 144 IPR001480 -
Pral4686g00054 792 ProSiteProfiles Bulb-type lectin domain profile. 24 141 IPR001480 -
Pral4686g00054 792 CDD STKc_IRAK 500 769 - -
Pral4686g00054 792 SMART serkin_6 494 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4686g00054 792 Pfam Protein kinase domain 497 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4686g00054 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Pral4686g00054 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 774 - -
Pral4686g00054 792 Pfam D-mannose binding lectin 71 159 IPR001480 -
Pral4686g00054 792 ProSiteProfiles Protein kinase domain profile. 494 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4686g00054 792 Gene3D - 25 178 - -
Pral4686g00054 792 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 28 778 - -
Pral4686g00054 792 FunFam S-receptor-like serine/threonine-protein kinase 464 571 - -
Pral4686g00054 792 Gene3D Phosphorylase Kinase; domain 1 456 571 - -
Pral4686g00054 792 PIRSF SRK 1 792 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00054 Pral-Chr4686 269098 271476 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00054 480 768 Receptor kinase-like Gene Family AT1G60800 41.892 6.46e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral4686g00054 Pkinase 2.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00054 - - gmx:100775269 891.723