Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00004 ATGACTTCGGGCGTCGAAGGAAGTGATTTAGCTGAGATATCTTGTGAGTCCGCAACAACCATGAACTTGTTCCCTACCAAGGAGAACGATAGAACACCGCAAAGCTTCTCTACAATGAACTTATTTCCGCATCTCTCCTCAGAAGAGATTCCAAAGATGGCAAATTCCAGTGTACCTAAGTCTGTCGCTAAGGAGCCTAGAGCTGCGCAGATGACAATCTTTTATGGTGGGCAAGTTTTCGTGTTGGATGATTTTCCTGCTGAAAAAGTCATGGAGATCTTGGCCTTTGCCAGCAAAGGAACATCATCCCCTATACAGAACAACAGCTCTGCTTATGCTTTTCCTCAGAGCCAGCCATCGTTTCCTCATAATTCAACTGGATTTTCTTCAGATTCCCAAAGGCCAGTTTCTCCTAACGTAAATAATATTCCTCATATTTGCAACACTTTGGTTCAAGGGAGTCCTCAGTCACCATCTGGACCTGTGGTTGGTGACCTTCCGATTGCTAGAAAAGCTTCGCTTCATCGTTTCTTGGAGAAGAGAAAGGACAGGATTGCCGCCAGAGCACCGTATCAAACAAGCAACCCCATGGCGGTTCCAAATAAGTCAAACGAATCCATGCCATGGCTTGAATTGGCTGCAAAGTCGCCCCACATCTGA 660 0.4576 MTSGVEGSDLAEISCESATTMNLFPTKENDRTPQSFSTMNLFPHLSSEEIPKMANSSVPKSVAKEPRAAQMTIFYGGQVFVLDDFPAEKVMEILAFASKGTSSPIQNNSSAYAFPQSQPSFPHNSTGFSSDSQRPVSPNVNNIPHICNTLVQGSPQSPSGPVVGDLPIARKASLHRFLEKRKDRIAARAPYQTSNPMAVPNKSNESMPWLELAAKSPHI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00004 219 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 28 200 IPR040390 -
Pral4686g00004 219 ProSiteProfiles Tify domain profile. 64 99 IPR010399 -
Pral4686g00004 219 Pfam tify domain 66 98 IPR010399 -
Pral4686g00004 219 Pfam Jas motif 167 192 IPR018467 -
Pral4686g00004 219 SMART tify_2 64 99 IPR010399 -
Pral4686g00004 219 MobiDBLite consensus disorder prediction 108 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00004 Pral-Chr4686 20923 22994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00004 19 215 Tify Gene Family AT1G19180 36.967 1.53e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral4686g00004 tify 1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00004 K13464 - gmx:100801449 216.853