Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00003 ATGGGTCGTAAACCTCACGACCCGGAGCCCACTCTTCCTCGTCGCTTGATCCTCTTTTTGGTTTGCTTGGTTTCGTGCGGTTTGGTCTACGCCTTCGCCTCGGCAGTGCTCACAAACATAGGGACCTCTCCCGTTGCGGAGTTGGTTGGAGATGGCGTGGCAATGGAGAATTCTGTGGAAGGTTATGGGGGATGCTGTAGAGGAATTGAAAATCTGGAGCTATGGGGTGCCGCTGTGAAGTGGGGTTCTGAGTTTAAATTTAATAATTCCGAAGATTGCTGCAACGCTTGTAAATCCATGTGTACTGGGAACGATGGACCGTGTCTCTGTGATTCGTGGGTGTTTTGTGGGAATCGTGAGACTTGCGGATCTAAGTTCGGCGAGTGCTGGTTGAAGAAACAAAAGGACAGCTTGGCTCCCGCACGACAAGAAGCTGGGGGAAAAGTTAGTTGGACTTCCGGTCTCATCTTTGGAAAAGGAGAAGGTATCATTGAATTGGAAACAGAACACGGAGCTCTTCGCGTCAAACTTTTCCCCGACTGTGCTCCACGCTCAGTGACCTACATTCTAGAGTTGCTGGCTTTGCGCCATTGTGCGGGGTGCCAATTTTACCGTGCAGAAGGCCGAGGCCAATCATGGGATGCAGAAGGAAACCACTTAAAAAATGCTCCTTTTGGTCCTCCTTCTGCATTAATTCAAGGAACCTTGGAAGCACAGGGAAACCCATTTAAGAAAATACCAGTGGAAGACTGTCCAACAATAAGAAGGGGTTCTATTGCTTGGGTTGATGGAGGACCAGAATTCTTCATAAGCCTTGCTAACCATGGGGAGTGGAGAAAAGCATACACAGTTTTTGGTTCTGTTCTTCCAGAAGACATGAGTATAGCCGAGAAAATTGCTGCACTCCCCACAGTTTCTGATGTTTGGAACAATATTAATGTCTCTGTCTTGGAAAAACCCGTTCCCTTGTTGCTACGGAGAATCCGGAAAAGCCCTGCAGATATCGACACCAATGCAAATTCAGATTAG 1029 0.4791 MGRKPHDPEPTLPRRLILFLVCLVSCGLVYAFASAVLTNIGTSPVAELVGDGVAMENSVEGYGGCCRGIENLELWGAAVKWGSEFKFNNSEDCCNACKSMCTGNDGPCLCDSWVFCGNRETCGSKFGECWLKKQKDSLAPARQEAGGKVSWTSGLIFGKGEGIIELETEHGALRVKLFPDCAPRSVTYILELLALRHCAGCQFYRAEGRGQSWDAEGNHLKNAPFGPPSALIQGTLEAQGNPFKKIPVEDCPTIRRGSIAWVDGGPEFFISLANHGEWRKAYTVFGSVLPEDMSIAEKIAALPTVSDVWNNINVSVLEKPVPLLLRRIRKSPADIDTNANSD 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00003 342 SUPERFAMILY Cyclophilin-like 159 314 IPR029000 -
Pral4686g00003 342 FunFam Predicted protein 159 322 - -
Pral4686g00003 342 PANTHER EXPRESSED PROTEIN 1 331 - -
Pral4686g00003 342 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 164 306 IPR002130 GO:0000413|GO:0003755
Pral4686g00003 342 Gene3D - 157 319 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00003 Pral-Chr4686 17732 20725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00003 159 289 U-box Gene Family AT5G67530 25.735 1.58e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00003 - - gmx:100820360 531.561