Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00002 ATGGAGGAACGGTATGAGCCACTGAAAGAACTTGGTTCTGGGAATTTCGGAGTGGCCAGGTTGGTGAGAGACAAGATCACGAAGGAACTTGTTGCTGTCAAGTACATAGAAAGAGGGAAAAAGATTGACGAGAAAGTTCAGAGGGAGATCATTAACCACCGATCTTTAAGGCACCCAAATATTATCAAGTTTAGAGAGGTCTTGCTGACCCCAACTCATTTAGCTATTGTCATGGAGTATGCTGCAGGCGGCGAACTCTTTGAGAGGATATGCAGTGCGGGTCGATTCAGTGAAGACGAGGCAAGATTTTTCTTCCAGCAGCTAATATCTGGAGTTAGCTACTGTCACTCAATGCAAATTTGTCACAGAGATTTGAAATTGGAGAACACTCTCTTGGATGGCAGTCCAACACCTCGACTGAAAATATGTGACTTCGGTTACTCCAAGTCTGCTATACTGCACTCTCAACCGAAATCTACTGTTGGAACACCTGCTTACATTGCTCCGGAGGTTCTGTCCCGAAAGGAATACGATGGAAAGATTGCGGATGTTTGGTCATGTGGTGTAACGCTTTATGTCATGTTAGTGGGAGGATACCCATTTGAAGATCCTGAAGATCCTAGGAATTTCCGGAAGACAATTGGAAGAATAATGAGTGTTCAGTACTCCATTCCCGACTATGTACGTGTCTCTGCGGATTGCAGACATCTTCTTTCTCGCATCTTTGTCGCCGACCCCGCCAAAAGGATAACGATCCCAGAGATAAAACAACACCCTTGGTTTTTGAAGAACCTGCCTAAAGAGATGAATGAAACAGAGAAAAAAGTCAACGAGGAAGCAGAGAAAGATCATCCGAGCCAGAGTGTTGAAGAAATACTGCGAATCGTACAAGAGGCAAGGATACCGGGGAAAGAATCAAAGGGCGGTGGGCAAGTTGGTGGAGGAGGATCATTGGACGGTGAGGATGATGATGAAGAATCGGAACTTGATGTTAGTGGTGACTATGCTACGACAACATAG 1020 0.451 MEERYEPLKELGSGNFGVARLVRDKITKELVAVKYIERGKKIDEKVQREIINHRSLRHPNIIKFREVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPTPRLKICDFGYSKSAILHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGGYPFEDPEDPRNFRKTIGRIMSVQYSIPDYVRVSADCRHLLSRIFVADPAKRITIPEIKQHPWFLKNLPKEMNETEKKVNEEAEKDHPSQSVEEILRIVQEARIPGKESKGGGQVGGGGSLDGEDDDEESELDVSGDYATTT 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00002 339 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Pral4686g00002 339 Coils Coil 262 282 - -
Pral4686g00002 339 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4686g00002 339 FunFam Serine/threonine-protein kinase SRK2E 1 80 - -
Pral4686g00002 339 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4686g00002 339 Gene3D Transferase(Phosphotransferase) domain 1 81 269 - -
Pral4686g00002 339 SUPERFAMILY Protein kinase-like (PK-like) 3 271 IPR011009 -
Pral4686g00002 339 PANTHER SERINE/THREONINE KINASE 3 287 - -
Pral4686g00002 339 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4686g00002 339 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Pral4686g00002 339 CDD STKc_SnRK2 4 260 - -
Pral4686g00002 339 MobiDBLite consensus disorder prediction 296 339 - -
Pral4686g00002 339 FunFam Serine/threonine-protein kinase SRK2E 81 269 - -
Pral4686g00002 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00002 Pral-Chr4686 13008 16644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00002 4 265 CBL-interacting serine-threonine protein kinases AT5G25110 42.857 7.50e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pral4686g00002 Pkinase 1.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00002 K14498 - csav:115716582 572.392