Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4685g00003 ATGAAGTGCTTCTTGTTCAAATTTAAAAGAGGATCGAAGTCCTCCTCCTCAGAATCGAAGAAACAATCACACAAGAATCATCCGGGTTCAAATCAGGCAGTGACTTCAACGAGTTCGCTGCCATCACCGAAAACAATAACAGAATTGTACAAAGAGAAAGAGCACAATTTGAGAGTTTTCACTTTGCAAGAGCTCAGGGAGGCCACGAATGATTTCAATAGGAGGCTGAAGATTGGAGAAGGGGGTTTCGGGAGCGTTTATAAAGGTACGATCAGGCCTCAAGATGGTCGAGGTGATCCTATTGTTATTGCGATAAAAAGCCTTAACACCCGTGGTTTTCAGGGGCATAAACAATGGCTGGCAGAGGTCCAATTTCTGGGCATTGTTAATCACCCAAATTTGGTGAAACTATTAGGATACTTCTCTCAAGATGGAGAAAGAGGAATCCAACGGGTGTTAGTTTATGAGTTCATGCCCAACGGGAGCCTGGAGGATCACCTTTTCGGACGGGCTTTCCCCACCTTGCCGTGGAAAATGAGATTGCAGATCATGCTCGGTGCTGCCCAAGGATTACTTTATCTACACGAGGAATTAGAGATTCAGGTAATATACCGAGATTTCAAATCTTCCAATGTTTTATTGGACACGAACTTCCATCCAAAGCTTTCGGATTTTGGTCTTGCTAGGGAAGGTCCAAGTGGTGACCAGACTCACGTGTCCACTGCGGTGGTGGGGACATATGGATATGCTGCCCCAGAATATATAGAAACAGGCCACCTCAAAGTTCAGAGTGATATATGGAGTTTTGGTGTGGTATTGTATGAGATACTTACAGGGAGGCAAGCATTGGATAGAAGGCGACCGAAAGAACAGAAGCTTCTAGATTGGGTCAAGCAGTATCCTGCTGATAGTGGGAGGTTCAGCGTGATAATGGACCCTCGACTCAGAAATGATTATTCGCATGGTGCTGCTCGGAAGGTAGCCAAGTTGGCAGACAGATGCTTAAACAAGAGACCGGAAGAAAGGCCATCTATGAGTCAGGTAGTGGAAAGCTTGAAGCAAGCATTGCAGTATTCAGAAACTTCAAAAAGGGCTTCTAAATTGGTTCCAAAAAGCAAATAG 1122 0.4474 MKCFLFKFKRGSKSSSSESKKQSHKNHPGSNQAVTSTSSLPSPKTITELYKEKEHNLRVFTLQELREATNDFNRRLKIGEGGFGSVYKGTIRPQDGRGDPIVIAIKSLNTRGFQGHKQWLAEVQFLGIVNHPNLVKLLGYFSQDGERGIQRVLVYEFMPNGSLEDHLFGRAFPTLPWKMRLQIMLGAAQGLLYLHEELEIQVIYRDFKSSNVLLDTNFHPKLSDFGLAREGPSGDQTHVSTAVVGTYGYAAPEYIETGHLKVQSDIWSFGVVLYEILTGRQALDRRRPKEQKLLDWVKQYPADSGRFSVIMDPRLRNDYSHGAARKVAKLADRCLNKRPEERPSMSQVVESLKQALQYSETSKRASKLVPKSK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4685g00003 373 Gene3D Transferase(Phosphotransferase) domain 1 158 370 - -
Pral4685g00003 373 MobiDBLite consensus disorder prediction 8 42 - -
Pral4685g00003 373 ProSitePatterns Protein kinases ATP-binding region signature. 78 106 IPR017441 GO:0005524
Pral4685g00003 373 Gene3D Phosphorylase Kinase; domain 1 44 157 - -
Pral4685g00003 373 CDD STKc_IRAK 78 354 - -
Pral4685g00003 373 SUPERFAMILY Protein kinase-like (PK-like) 54 352 IPR011009 -
Pral4685g00003 373 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 158 366 - -
Pral4685g00003 373 MobiDBLite consensus disorder prediction 26 42 - -
Pral4685g00003 373 PANTHER OS01G0588500 PROTEIN-RELATED 19 356 - -
Pral4685g00003 373 Pfam Protein kinase domain 75 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4685g00003 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Pral4685g00003 373 ProSiteProfiles Protein kinase domain profile. 72 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4685g00003 Pral-Chr4685 5167 7678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4685g00003 3 352 Glycoside Hydrolase AT3G07070 40.921 2.12e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral4685g00003 Pkinase 7.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4685g00003 - - gmx:100305403 553.903