Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4684g00072 ATGAAGTGCTTCTTGTTCAAATTTAAAAGAGGATCGAAGTCCTTCCTCAGAAAGAAGAAGAAACAATCACACAAGAATCATCCGGGTTCAAATCAGGCAGTGACTTCAACGAGTTCGCTGCCATCACCGAAAACAATAACAGAATTGTACAAAGAGAAAGAGCACAATTTGAGAGTTTTCACTTTGCAAGAGCTCAGGGAGGCCACGAATGATTTCAATAGGAGGCTGAAGATTGGAGAAGGGGGTTTCGGGAGCGTTTATAAAGGTACGATCAGGCCTCAAGATGGTCGAGGTGTCATTAGTATTGCGATAAAAAGCCTTAACACCCGTGGTTTTCAGGGGCATAAACAATGGCTGGCAGAGGTCCAATTTCTGGGCATTGTTAATCACCCAAATTTGGTGAAACTATTAGGATACTTCTCTCAAGATGGAGAAAGAGGAATCCAACGGGTGTTAGTTTATGAGTTCATGCCCAACGGGAGCCTGGAGGATCACCTTTTCGGACGGGCTTTCCCCACCTTGCCGTGGAAAATGAGATTGCAGATCATGCTCGGTGCTGCCCAAGGATTACTTTATCTACACGAGGAATTAGAGATTCAGGTAATATACCGAGATTTCAAATCTTCCAATGTTTTATTGGACACGAACTTCCATCCAAAGCTTTCGGATTTTGGTCTTGCTAGGGAAGGTCCAAGTGGTGACCAGACTCACGTGTCCACTGCGGTGGTGGGGACATATGGATATGCTGCCCCAGAATATATAGAAACAGGCCACCTCAAAGTTCAGAGTGATATATGGAGTTTTGGTGTGGTATTGTATGAGATACTTACAGGGAGGCAAGCATTGGATAGAAGGCGACCGAAAGAACAGAAGCTTCTAGATTGGGTCAAGCAGTATCCTGCTGATAGTGGGAGGTTCAGCGTGATAATGGACCCTCGACTCAGAAATGATTATTCGCATGGTGCTGCTCGGAAGGTAGCCAAGTTGGCAGACAGATGCTTAAACAAGAGACCGGAAGAAAGGCCATCTATGAGTCAGGTAGTGGAAAGCTTGAAGCAAGCATTGCAGTATTCAGAAACTTCAAAAAGGGCTTCTAAATTGGTTCCAAAAAGCAAATAG 1119 0.4459 MKCFLFKFKRGSKSSXLRKKKKQSHKNHPGSNQAVTSTSSLPSPKTITELYKEKEHNLRVFTLQELREATNDFNRRLKIGEGGFGSVYKGTIRPQDGRGVIIXIAIKSLNTRGFQGHKQWLAEVQFLGIVNHPNLVKLLGYFSQDGERGIQRVLVYEFMPNGSLEDHLFGRAFPTLPWKMRLQIMLGAAQGLLYLHEELEIQVIYRDFKSSNVLLDTNFHPKLSDFGLAREGPSGDQTHVSTAVVGTYGYAAPEYIETGHLKVQSDIWSFGVVLYEILTGRQALDRRRPKEQKLLDWVKQYPADSGRFSVIMDPRLRNDYSHGAARKVAKLADRCLNKRPEERPSMSQVVESLKQALQYSETSKRASKLVPKSK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4684g00072 374 MobiDBLite consensus disorder prediction 28 46 - -
Pral4684g00072 374 ProSiteProfiles Protein kinase domain profile. 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4684g00072 374 CDD STKc_IRAK 79 355 - -
Pral4684g00072 374 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 159 367 - -
Pral4684g00072 374 Pfam Protein kinase domain 76 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4684g00072 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Pral4684g00072 374 Gene3D Phosphorylase Kinase; domain 1 45 158 - -
Pral4684g00072 374 PANTHER OS01G0588500 PROTEIN-RELATED 31 357 - -
Pral4684g00072 374 SUPERFAMILY Protein kinase-like (PK-like) 55 353 IPR011009 -
Pral4684g00072 374 Gene3D Transferase(Phosphotransferase) domain 1 159 371 - -
Pral4684g00072 374 MobiDBLite consensus disorder prediction 18 46 - -
Pral4684g00072 374 ProSitePatterns Protein kinases ATP-binding region signature. 79 107 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4684g00072 Pral-Chr4684 370047 372775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4684g00072 3 353 Glycoside Hydrolase AT3G07070 42.005 7.45e-89 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral4684g00072 Pkinase 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4684g00072 - - gmx:100305403 545.043