Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4684g00038 ATGGTTTGTACTGCCAATGATTTACAAAGCTGGAAAGATTTTCCCAAGGGACTTAGGGTTCTTCTCCTTGATGGGAACACCAATTCTGCTGCCGATATAAGAGCAAAGCTGGAGGCCATGGACTATATTGTTTCTATATTCTGCAACGAGAATGAAGCCTTGTCGGCAATCTCAAGCAAACCCGAAGGCTTCCATGTTGCCATTGTGGAGGTTAGTACAAGCAATGACCAAGGGTGTTTCAAATTTCTTGAGAATGCCAAGGACCTGCCAACCATTATGACTTCAAACGATCATTGCCTCAGCACTATGATGAAGTGTATAGCACTTGGCGCAGTTGAGTTCCTAAGAAAACCGCTCTCTGAAGAAAAGCTCAGGAATATCTGGCAGCATGTGGTTCACAAGGCATTTAATGCTGGGGCAACTGTCCTGTCTGAATCACTAAAGCCTGTCAAAGAATCTGTGGTATCAATATTGCAGCTCGAAACAGAAAATAAGGAACAGCAAAGTAAAATCTCAATAGATATCGAGAAAGTATCAAGGTTTAGTGAACATGACCATGAGCTATCATCGGGGAGTGATAATAAATATCCAGCTCCTTCAACTCCACAATTAAAACAGGGGGCTAGATTACTGGATGATGGAGATTGCCATGAACAGACTCATTGCTTGACTGAAAAAGAAAGTGGAGACCTGGATGGGGAAACTATATCTGTCGAAACTACATGTGGAAATTCGAATTCTGAGGGTGCTACACCTCAACCAAGTAAGCCTGAAACGACTCTAATTAAGAAGGAAGAGGAGTATGCCAATGGTTCCAAGAGTGAGAGTGATGTATCTACACATAATCATGATGGAAATTTTGTGAGCAGCCATGATGATAGCACTGCATCTCCCAAAAAAGTAGGTGTTCTCAGTGATGCATGCGAGAACACAGCTAATAAAAAGAAATCAAAGAAGGTGAAGGTAGACTGGACGCCTGAACTGCATAACAAATTTGTTCATGCAGTGGAACAACTAGGTATTGATCAAGCCATACCTTCTCGAATTCTGGAGCTAATGAAAGTGGAGGGGTTGACAAGGCATAATGTGGCTAGCCATCTTCAGAAATATAGAATGCACAAGAGACATATCTTGCCTAAGGAAGAAGATCGAAGATGGCCAAATCAAAGAGATATAATGCAAAGGAGCTATTATGTGCCAAGGCCCATTATGGCCTATCCTCAATATCATTCTAACCACACCTTATCTCCAGCTCCTATGTATCCTATGTGGGGTCAACCAGGAAGTCAACCGGCTGGTGTACAGATGTGGGGCCCACCTAACTATCACGTATGGCAGCCTTTTCCGGGGATGCACGCAGAAGCATGGGGTTGCCCTGTGTTGCCACCTTCTCAAAATCCTTGTTTTTACCACACTCAACATACGCCTGGATTGCACAGTGCTAATAACGTTGATTATAACTCTAGCATGCCTCCAAGTTCGTTGGAGCATCATCCGGCGGATGAAGTTGTTGACAAGGTTGTGAAGGAGGCAATAAGCAAGCCATGGCTGCCCTTGCCCTTGGGTCTCAAACCTCCTTCCACAGATAGCGTATTGGCTGAACTTTCTCGGCAAGGCATATCCACCATCCCTCATGGTTCCAAATCTATATAG 1653 0.4392 MVCTANDLQSWKDFPKGLRVLLLDGNTNSAADIRAKLEAMDYIVSIFCNENEALSAISSKPEGFHVAIVEVSTSNDQGCFKFLENAKDLPTIMTSNDHCLSTMMKCIALGAVEFLRKPLSEEKLRNIWQHVVHKAFNAGATVLSESLKPVKESVVSILQLETENKEQQSKISIDIEKVSRFSEHDHELSSGSDNKYPAPSTPQLKQGARLLDDGDCHEQTHCLTEKESGDLDGETISVETTCGNSNSEGATPQPSKPETTLIKKEEEYANGSKSESDVSTHNHDGNFVSSHDDSTASPKKVGVLSDACENTANKKKSKKVKVDWTPELHNKFVHAVEQLGIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRHILPKEEDRRWPNQRDIMQRSYYVPRPIMAYPQYHSNHTLSPAPMYPMWGQPGSQPAGVQMWGPPNYHVWQPFPGMHAEAWGCPVLPPSQNPCFYHTQHTPGLHSANNVDYNSSMPPSSLEHHPADEVVDKVVKEAISKPWLPLPLGLKPPSTDSVLAELSRQGISTIPHGSKSI 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4684g00038 550 NCBIfam myb-like DNA-binding domain, SHAQKYF class 319 374 IPR006447 GO:0003677
Pral4684g00038 550 Gene3D - 315 377 - -
Pral4684g00038 550 SUPERFAMILY CheY-like 16 134 IPR011006 -
Pral4684g00038 550 SUPERFAMILY Homeodomain-like 318 376 IPR009057 -
Pral4684g00038 550 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Pral4684g00038 550 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 545 IPR044825 GO:0003700|GO:0045893
Pral4684g00038 550 MobiDBLite consensus disorder prediction 234 258 - -
Pral4684g00038 550 MobiDBLite consensus disorder prediction 182 206 - -
Pral4684g00038 550 FunFam Two-component response regulator-like APRR2 17 143 - -
Pral4684g00038 550 Gene3D - 18 141 - -
Pral4684g00038 550 Pfam Myb-like DNA-binding domain 322 371 IPR001005 -
Pral4684g00038 550 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 316 375 IPR017930 -
Pral4684g00038 550 MobiDBLite consensus disorder prediction 259 280 - -
Pral4684g00038 550 MobiDBLite consensus disorder prediction 222 299 - -
Pral4684g00038 550 MobiDBLite consensus disorder prediction 281 296 - -
Pral4684g00038 550 FunFam Two-component response regulator 315 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4684g00038 Pral-Chr4684 163587 169999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4684g00038 1 547 Response Regulator Gene Family AT4G18020 48.427 1.56e-146 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Pral4684g00038 Myb_DNA-binding 7.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4684g00038 - - gmx:100779121 794.653