Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4684g00036 ATGGTTTGTACTGCCAATGATTTACAAAGCTGGAAAGATTTTCCCAAGGGACTTAGGGTTCTTCTCCTTGATGGGAACACCAATTCTGCTGCCGATATAAGAGCAAAGCTGGAGGCCATGGACTATATTGTTTCTATATTCTGCAACGAGAATGAAGCCTTGTCGGCAATCTCAAGCAAACCCGAAGGCTTCCATGTTGCCATTGTGGAGGTTAGTACAAGCAATGACCAAGGGTGTTTCAAATTTCTTGAGAATGCCAAGGACCTGCCAACCATTATGACTTCAAACGATCATTGCCTCAGCACTATGATGAAGTGTATAGCACTTGGCGCAGTTGAGTTCCTAAGAAAACCGCTCTCTGAAGAAAAGCTCAGGAATATCTGGCAGCATGTGGTTCACAAGGCATTTAATGCTGGGGCAACTGTCCTGTCTGAATCACTAAAGCCTGTCAAAGAATCTGTGGTATCAATATTGCAGCTCGAAACAGAAAATAAGGAACAGCAAAGTAAAATCTCAATAGATATCGAGAAAGTATCAAGGTTTAGTGAACATGACCATGAGCTATCATCGGGGAGTGATAATAAATATCCAGCTCCTTCAACTCCACAATTAAAACAGGGGGCTAGATTACTGGATGATGGAGATTGCCATGAACAGACTCATTGCTTGACTGAAAAAGAAAGTGGAGACCTGGATGGGGAAACTATATCTGTCGAAACTACATGTGGAAATTCGAATTCTGAGGGTGCTACACCTCAACCAAGTAAGCCTGAAACGACTCTAATTAAGAAGGAAGAGGAGTATGCCAATGGTTCCAAGAGTGAGAGTGATGTATCTACACATAATCATGATGGAAATTTTGTGAGCAGCCATGATGATAGCACTGCATCTCCCAAAAAAGTAGGTGTTCTCAGTGATGCATGCGAGAACACAGCTAATAAAAAGAAATCAAAGAAGGTAGACTGGACGCCTGAACTGCATAACAAATTTGTTCATGCAGTGGAACAACTAGGTATTGATCAAGCCATACCTTCTCGAATTCTGGAGCTAATGAAAGTGGAGGGGTTGACAAGGCATAATGTGGCTAGCCATCTTCAGAAATATAGAATGCACAAGAGACATATCTTGCCTAAGGAAGAAGATCGAAGATGGCCAAATCAAAGAGATATAATGCAAAGGAGCTATTATGTGCCAAGGCCCATTATGGCCTATCCTCAATATCATTCTAACCACACCTTATCTCCAGCTCCTATGTATCCTATGTGGGGTCAACCAGGAAGTCAACCGGCTGGTGTACAGATGTGGGGCCCACCTAACTATCACGTATGGCAGCCTTTTCCGGGGATGCACGCAGAAGCATGGGGTTGCCCTGTGTTGCCACCTTCTCAAAATCCTTGTTTTTACCACACTCAACATACGCCTGGATTGCACAGTGCTAATAACGTTGATTATAACTCTAGCATGCCTCCAAGTTCGTTGGAGCATCATCCGGCGGATGAAGTTGTTGACAAGGTTGTGAAGGAGGCAATAAGCAAGCCATGGCTGCCCTTGCCCTTGGGTCTCAAACCTCCTTCCACAGATAGCGTATTGGCTGAACTTTCTCGGCAAGGCATATCCACCATCCCTCATGGTTCCAAATCTATATAG 1647 0.439 MVCTANDLQSWKDFPKGLRVLLLDGNTNSAADIRAKLEAMDYIVSIFCNENEALSAISSKPEGFHVAIVEVSTSNDQGCFKFLENAKDLPTIMTSNDHCLSTMMKCIALGAVEFLRKPLSEEKLRNIWQHVVHKAFNAGATVLSESLKPVKESVVSILQLETENKEQQSKISIDIEKVSRFSEHDHELSSGSDNKYPAPSTPQLKQGARLLDDGDCHEQTHCLTEKESGDLDGETISVETTCGNSNSEGATPQPSKPETTLIKKEEEYANGSKSESDVSTHNHDGNFVSSHDDSTASPKKVGVLSDACENTANKKKSKKVDWTPELHNKFVHAVEQLGIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRHILPKEEDRRWPNQRDIMQRSYYVPRPIMAYPQYHSNHTLSPAPMYPMWGQPGSQPAGVQMWGPPNYHVWQPFPGMHAEAWGCPVLPPSQNPCFYHTQHTPGLHSANNVDYNSSMPPSSLEHHPADEVVDKVVKEAISKPWLPLPLGLKPPSTDSVLAELSRQGISTIPHGSKSI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4684g00036 548 SUPERFAMILY Homeodomain-like 316 374 IPR009057 -
Pral4684g00036 548 SUPERFAMILY CheY-like 16 134 IPR011006 -
Pral4684g00036 548 Gene3D - 18 141 - -
Pral4684g00036 548 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Pral4684g00036 548 MobiDBLite consensus disorder prediction 234 258 - -
Pral4684g00036 548 MobiDBLite consensus disorder prediction 182 206 - -
Pral4684g00036 548 NCBIfam myb-like DNA-binding domain, SHAQKYF class 318 372 IPR006447 GO:0003677
Pral4684g00036 548 MobiDBLite consensus disorder prediction 259 280 - -
Pral4684g00036 548 Pfam Myb-like DNA-binding domain 320 369 IPR001005 -
Pral4684g00036 548 MobiDBLite consensus disorder prediction 222 299 - -
Pral4684g00036 548 MobiDBLite consensus disorder prediction 281 296 - -
Pral4684g00036 548 FunFam Two-component response regulator-like APRR2 17 143 - -
Pral4684g00036 548 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 314 373 IPR017930 -
Pral4684g00036 548 Gene3D - 313 375 - -
Pral4684g00036 548 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 543 IPR044825 GO:0003700|GO:0045893
Pral4684g00036 548 FunFam Two-component response regulator 312 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4684g00036 Pral-Chr4684 163587 170001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4684g00036 1 545 Response Regulator Gene Family AT4G18020 48.336 1.58e-146 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Pral4684g00036 Myb_DNA-binding 7.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4684g00036 - - gmx:100779121 795.808