Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4684g00020 ATGGGAAGCGGACTTTCTAGCCTCCTTCCTTGCTGCAAACCGGCTAACCGGACCACCAGCGAACCGGATCAGCAGGAAGTGATCTTTGCCGCCACTGAGCCCTTGGACGAAACCCTAGGCCACTCCTTCTGCTACGTTAGATCTTCCGCTCGCTTTCTTTCCCCCACTCACTCGGATCGATTCGTCTCGCCTTCTAACTCCCTCCGCTTTTCTCCTCCTCATGAACCCGTATCGAGGGCCCGACCCGATTTGCCCGAAACCGTCTTCAAGGCCATTTCCGGAGCTTCCGTTAGCGCCAACAGTTCCACTCCCAAAACTGTTCTCCAGCTGGACAATATCCACGATGATGTTGCGGACTGTGCCGCTGGTGGCGGCGTGAGGGGAAACATTGTGAATGGCTTCGAGAGCACATCATCGTTCAGTGCTCTCCCGCTTCAGCCAGTCCCCCGGGGGGGTGACCCCTCAGGTCCGGTAGATAGGGGAGCCTTCTTTCTGTCTGGCCCAATTGAACGCGGCGCCCTCTCTGGCCCCCTCGAGCCCAACGCCACCACCGAAGGTGGAGGCGGCGTCCCTTTCTCGGCGCCTCTTGGTGGCATTTATGTCAAAAAGAAGCGGAAGAGGAGCATTTCGGGGTTTCGGAAGGCATTCCATGGGAACCTTTCGGAGAAGAAGCGGCCATGGGTTGTGCCAGTGTTAAATTTCGTAGGAAGAAAGGATGTTACGGCAAGCGAAGAGAAATCGGAGATAAAGAGTGAGAGTAATGTACAGTGGGCGCATGGGAAGGCGGGAGAGGATCGGGTACACGTAGTTGCGGAAGAGCACGGCTGGTTGTTTGTTGGTATATACGACGGCTTCAATGGCCCTGACGCGCCGGAATTTCTGATGGGTCATCTATACCGTGCAGTGTACAATGAATTACAGGGTCTGTTTTGGGAAGCTGAAGAAGCGGAGGAAAATAACCCATCGACCGCCCCTGCGGAGAATGCATTACTTGGAGAACAATCTGAACCATCGATTGAAATCTCCCACGCAGACTTAAAAAATGAGGGGGGCGTATCTGTGAGTAGAGAGGACTTAAATTCTTTGCCTGCTGATGGAGAATCAGCAAAGAGAGTAACGTTTCAAGCGGACGGAACGGAAAGTAGGCGGCGTAGATTATGGGAGTTACTCGCCGAAGCTGATGCTGAAGACGGGCTTGATCTTTCTGGGTCAGATAGATTTGCATTTTCCGTTGATGATGCTCTGAGCGTAAGCAATGCGGGCTCAGCCGTTAGCAGACGATGGCTATTATTATCGAAGTTGAAACATGGATTATCAAAACATAAGGAGGGTCAAGGTAGCAAGTTGTTTCCCTGGAAACTAGGCACAGAAGATAAAGAGAAGGTTGAGGTGGAAAATCGGGCTGAAGAAAAACCATCCCGTGGCAATAGGAGGCGGAAAGTGGGTCCCGTGGATCATGATTCGGTTTTGAGAGCATTATCTCGGGCTCTTGAATTGACCGAACTTGCATACTTGGATATGACGGACAAGATTCTTGATACAAGCCCGGAGATCGCTTTAATGGGGTCATGTCTGTTAGTTGTTTTAATGAGGGATGAAGATGTTTACGTGATGAATGTGGGAGACAGCCGAGCCATTGTTGCACAGCATGAGCCCAGAGAGGCTAATTCTAGCGTGGAATTGGAGAGCAAAGGAGATAAGGGGTCAAGCACAGAGAGCATAGTTGAGGAGTCCTCAGCTCCTGGTGAAAGTGCAAACAAGTCGGGGATTGAGGATCCTGCTCAAGAAATGAGGTTGATTGCATTGCAGCTGTCCACTGACCACAGCACGAGCATTGAAGAGGAAGTCATTAGGATTAAGAATGAACATCCAGATGATAACCAATGCATTGTAAATGACAGAGTTAAAGGTCGTCTTAAGGTTACCAGAGCATTTGGGGCAGGATTTTTGAAACAGCCAAAGTGGAATGATCCTTTACTGGAAATGTTTCGTAATGAATATATTGGCACTGCTCCATATATATCCTGCTGCCCTTCGCTACGTCATCATAGATTATGCCCAAGAGATCAGTTCCTGATCCTCTCATCTGATGGGTTATATCAATATCTAAGCAATCAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCTGATGGAGATCCTGCTCAACATTTGATTGAGGAGCTTCTCCTCCGTGCAGCAAAGAAAGCTGGAATGGATTTACATGACTTGTTGGATATCCCACAAGGAGATAGGAGGAAATACCATGATGATGTTACTGTCATGGTGATATCACTTGAAGGCCGAATCTGGAAATCATCAGGAAAGTATCTGTGA 2346 0.4923 MGSGLSSLLPCCKPANRTTSEPDQQEVIFAATEPLDETLGHSFCYVRSSARFLSPTHSDRFVSPSNSLRFSPPHEPVSRARPDLPETVFKAISGASVSANSSTPKTVLQLDNIHDDVADCAAGGGVRGNIVNGFESTSSFSALPLQPVPRGGDPSGPVDRGAFFLSGPIERGALSGPLEPNATTEGGGGVPFSAPLGGIYVKKKRKRSISGFRKAFHGNLSEKKRPWVVPVLNFVGRKDVTASEEKSEIKSESNVQWAHGKAGEDRVHVVVXEEHGWLFVGIYDGFNGPDAPEFLMGHLYRAVYNELQGLFWEAEEAEENNPSTAPAENALLGEQSEPSIEISHADLKNEGGVSVSREDLNSLPADGESAKRVTFQADGTESRRRRLWELLAEADAEDGLDLSGSDRFAFSVDDALSVSNAGSAVSRRWLLLSKLKHGLSKHKEGQGSKLFPWKLGTEDKEKVEVENRAEEKPSRGNRRRKVGPVDHDSVLRALSRALELTELAYLDMTDKILDTSPEIALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQHEPREANSSVELESKGDKGSSTESIVEESSAPGESANKSGIEDPAQEMRLIALQLSTDHSTSIEEEVIRIKNEHPDDNQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDPLLEMFRNEYIGTAPYISCCPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDLHDLLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4684g00020 782 MobiDBLite consensus disorder prediction 556 572 - -
Pral4684g00020 782 Gene3D - 235 777 IPR036457 -
Pral4684g00020 782 SMART PP2C_4 248 768 IPR001932 -
Pral4684g00020 782 Pfam Protein phosphatase 2C 604 738 IPR001932 -
Pral4684g00020 782 Pfam Protein phosphatase 2C 498 552 IPR001932 -
Pral4684g00020 782 CDD PP2Cc 486 770 IPR001932 -
Pral4684g00020 782 MobiDBLite consensus disorder prediction 550 593 - -
Pral4684g00020 782 PANTHER PROTEIN PHOSPHATASE 2C 245 769 IPR015655 GO:0004722|GO:0006470
Pral4684g00020 782 SUPERFAMILY PP2C-like 260 771 IPR036457 -
Pral4684g00020 782 ProSiteProfiles PPM-type phosphatase domain profile. 248 770 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4684g00020 Pral-Chr4684 53241 58827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4684g00020 1 782 PP2C-type Phosphatase Gene Family AT2G35350 58.404 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4684g00020 - - qsa:O6P43_024469 1186.4