Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4684g00015 ATGGGAGGTGCGTCACTGCCACCAGGTTTTCGATTCCACCCGACTGACGAAGAACTGGTGGGATATTACCTGAAAAGAAAAGTGGAGGGGCTGGAAATTGAGCTTGAAGTTATCCCCGTCATTGATCTTTACAAATTTGATCCCTGGGAGTTACCGGAGAAATCATTCCTTCCGAAGAGAGATATGGAATGGTTTTTCTTCTGTCCCAGGGATCGAAAGTATCCGAATGGATCAAGAACAAACAGAGCAACCAAAGCTGGATACTGGAAAGCCACCGGAAAAGACAGAAAGGTTGTGTGCCACTGTTCTCCTTCCTCTGTCACCGGTTACCGCAAAACTCTGGTTTTCTATTGTGGAAGAGCCCCTTTAGGAGATCGAACCAACTGGGTCATGCACGAGTATCGCCTTTGTGATGATCTTGCCACAGGATCACCAAGCTTTCAGGGTGCTTTTGCTCTGTGCCGAGTGATTAAGAAGAATGAGAAACCAAATGATTTGAAGGGAGAACACAAGGGTAAAAAGGCTGGAAGCAGTTCTGTTAATGGGAATGACACCTCAATGAGAATCTCAAATGAGCCTTTCAACATCTCCGGTGACGTTTCGTCACAAACAAGTCATCTCTACAATGAGAGTGGTCATTCAAGCCCTATTACTTCTCCCTCCGATGCGGTTCAGACGGCAGAGTTCGAGCAAGCTTCCATGGAGACCAATCCTTCAGATATTTGGATTTCTCCAGATTTTATTCTTGATTCTTCAAAGGACTATCCTGAAGTACAACATGCAGTGTCGGAATACTTTCCACAGTATGACTTATCAAGCTCAATGACCCCATGGCAGCCAATGGAACACACAGAAATTTCACCCTCTTCATCCTACTCAAATTTGAATGGGGAGATTGAATCTGCTGGTGATATTAGTATGTCAACCTACATGGAGGCACAGGCAAATTTCATGAACTTTTATGGAAATGACCCTATGCCTTATGGAGGTTTTGATCAGATCAATTCAATCACGTATCCGAGACATTTCTAA 1032 0.4428 MGGASLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCHCSPSSVTGYRKTLVFYCGRAPLGDRTNWVMHEYRLCDDLATGSPSFQGAFALCRVIKKNEKPNDLKGEHKGKKAGSSSVNGNDTSMRISNEPFNISGDVSSQTSHLYNESGHSSPITSPSDAVQTAEFEQASMETNPSDIWISPDFILDSSKDYPEVQHAVSEYFPQYDLSSSMTPWQPMEHTEISPSSSYSNLNGEIESAGDISMSTYMEAQANFMNFYGNDPMPYGGFDQINSITYPRHF 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4684g00015 343 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Pral4684g00015 343 FunFam Nac domain-containing protein 86 15 162 - -
Pral4684g00015 343 Gene3D NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
Pral4684g00015 343 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 228 - -
Pral4684g00015 343 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Pral4684g00015 343 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Pral4684g00015 343 MobiDBLite consensus disorder prediction 163 232 - -
Pral4684g00015 343 MobiDBLite consensus disorder prediction 176 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4684g00015 Pral-Chr4684 38517 44635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4684g00015 1 335 NAC Transcription Factor Family AT4G17980 53.097 1.27e-112 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4684g00015 NAM 2.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4684g00015 - - gmx:100796849 526.554