Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4680g00005 ATGGGTGGTGCTGGTAAGACCACACTTGCTAAAGCTATACTTCAAGAGTTGAAAGCTCAATTTGAGGCTTTCTCCTTTATTGAAAATGTCAAAGAGCACTTAGCAAGAATTAGTTTGGATGAGTTACAGAAAAATTGCCTCAGAGAATTATTAAAAGATGAGGACATTAGCATCTATGACATAAAATCCCCTTTTATGAAAAATAGGCTTCAAAACAAAAAAATTCTTCTTATACTTGATGATGTTGACAATTCAATAGTGGCGGCAGATTTAACCAAGGTACTTGATTGGTTTGGAGAAGGAAGTAGAATTATTATCACATCAAGGGACATGCAAGTGCTGAAGAATGCTTCTGCGGCATTTTCAACATATCATGTTCCAGATTTGGATTTTGAAGATGCCTTTCATCTCTTCAATTTGAAAGCATTCAAGCGAAATGAGTCATCTAAAGGTTACATGGAGTTATCAAAATCAGTAGTGAAATATTGTCACGGAAACCCGTTAGCCCTAGTAGTGTTGGGTTGCTTCCTCTACAACCGACAAAAAGAAGAGTGGGAAAGTGCATTGGAAAAACTAAATCAAGGTCCACCAAAGGACATTGTTGATGTTTTGAAGTTGAGTTTCGATGGACTTGATGACAAACAACAGAACGTGTTTCTTGACCTAGCATTCTTAATTAAGCAAGGAGTTCGTATTTCTTTGAACCTAATGAGACAATTATATTGCTCTTCTATGTATATTGAGATAAATGTTCTTAGAGAAAAGTCGCTCATTTCATTTAATAATCATAATGATTTCATTGAGATGCATGATCTTGTGAGGGAAATGGGCCTTGAAATTTCAAGCCAACAGTTATTCTCTGGTCGTAAAACCCCTGTTCGACTATGGAGGCACGAGGACACTTACCACTTTTTCCACAATGACCAGGCAATTGAGGCAATTCGATGCATGTCGTTGGATGCAAGCAAGATAGAAAGCATCACATTGATGGCTAGTCATTTTCGAAGGATGCATTATTTAATGTCCCTTCAAGTTTACAAGTCAGATCGGGAAAAGCCTTCAAAGTTGAATATTTGTGAACCGTTGGATTATCTTTCTAAAGAATTAAGGTTTCTTAGTTGGGAAGAATATCCATTGCCATCTGTGCCATTACAATTTTGTGCTAAGAATCTCATTGAACTTAATTTGCCTGACAGTAATATCCAACAACTTTGGAATCAGCAATTTCCAAATCTAAAGAAAATAAATCTATGGTATTCAAAAAATCTCAAGGCACTCCCAGATTTGTCTCAAGCCCCTATGATTGAATGTATGATTCTTCATGGTTGCATGAATTTGGGTCAAATCTACTCTTCGACTATCCCGAAACAGCGTGTCGATTTATTTATAGGAGATTGTGGGCCGATGCAGATAAATGTTGGGGGCAGTATAAAAGGGAGAAGTTCATCAGGGTTAATGATTATGCGTAGTTATTTGGATCTTGTCGATTTGACATTCAATAAAGTGACAATGAAGGTGATGGTGTGCGGCAATATGATGTGTGGCGTTGGATTTAAGCATGTGACAATGCCATTGAAAGAGACGACAGAATTCATGAGAATGGGAATACAAAGTTTGGTGACTTTACTTCCATTTGTGAGGACAGTTGAATGGTTAGAGGGTTTGATTGAGTTTGGGCATGATTTCAACCAACATCATACTTGTGATGTTCATCATTATTACAACGAAAATGTTCCCTCTGGTATTATTGTGAGGGTGAGGGGTAATAGAGGTGAAAGGGGTGTGAAAGATGATGAAGAAGAGGATGAGGATGATAGAGAAATGATTAGTAAAGGTGATCAAGTAGTAGAGATGACATTATTATTAATGGAAGATGAGGATGATAGTAAGATGGACGATACATTGCTAACAACACTACTTATTCCCAACACCATCCCTCGCTGGTCACTATTGATTCGACTGACATTAAAAGAGGGTGATAGTATTGGGAATAATAATGCAGGTTGCAGCAGCATCCCTCAAGTTTCAATATTCCTCAAATCACTTAATGAAGATTGCAGGGCAAGGATTCAGCCTCTTTTAGGAGTACAACTCTCTTCCCCAATATCTCCTTTACCTCATCATTCTTTCAAAGTCTTTTATAACTACTTGGAGAGGATGCTACAACGTCCTCGTTTTTTTTTTTTCAACAGTGAATACTATGGTCATGACTTAGTTGTTCACTTTATGAAGTACTGCTGTTGA 2244 0.3743 MGGAGKTTLAKAILQELKAQFEAFSFIENVKEHLARISLDELQKNCLRELLKDEDISIYDIKSPFMKNRLQNKKILLILDDVDNSIVAADLTKVLDWFGEGSRIIITSRDMQVLKNASAAFSTYHVPDLDFEDAFHLFNLKAFKRNESSKGYMELSKSVVKYCHGNPLALVVLGCFLYNRQKEEWESALEKLNQGPPKDIVDVLKLSFDGLDDKQQNVFLDLAFLIKQGVRISLNLMRQLYCSSMYIEINVLREKSLISFNNHNDFIEMHDLVREMGLEISSQQLFSGRKTPVRLWRHEDTYHFFHNDQAIEAIRCMSLDASKIESITLMASHFRRMHYLMSLQVYKSDREKPSKLNICEPLDYLSKELRFLSWEEYPLPSVPLQFCAKNLIELNLPDSNIQQLWNQQFPNLKKINLWYSKNLKALPDLSQAPMIECMILHGCMNLGQIYSSTIPKQRVDLFIGDCGPMQINVGGSIKGRSSSGLMIMRSYLDLVDLTFNKVTMKVMVCGNMMCGVGFKHVTMPLKETTEFMRMGIQSLVTLLPFVRTVEWLEGLIEFGHDFNQHHTCDVHHYYNENVPSGIIVRVRGNRGERGVKDDEEEDEDDREMISKGDQVVEMTLLLMEDEDDSKMDDTLLTTLLIPNTIPRWSLLIRLTLKEGDSIGNNNAGCSSIPQVSIFLKSLNEDCRARIQPLLGVQLSSPISPLPHHSFKVFYNYLERMLQRPRFFFFNSEYYGHDLVVHFMKYCC 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4680g00005 747 Gene3D Ribonuclease Inhibitor 308 505 IPR032675 -
Pral4680g00005 747 Gene3D - 1 123 IPR027417 -
Pral4680g00005 747 SUPERFAMILY "Winged helix" DNA-binding domain 199 304 IPR036390 -
Pral4680g00005 747 SUPERFAMILY L domain-like 314 457 - -
Pral4680g00005 747 Gene3D - 128 212 IPR042197 -
Pral4680g00005 747 Pfam NB-ARC domain 1 195 IPR002182 GO:0043531
Pral4680g00005 747 PRINTS Disease resistance protein signature 407 423 - -
Pral4680g00005 747 PRINTS Disease resistance protein signature 69 83 - -
Pral4680g00005 747 PRINTS Disease resistance protein signature 163 177 - -
Pral4680g00005 747 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 488 IPR044974 GO:0006952
Pral4680g00005 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 222 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4680g00005 Pral-Chr4680 84268 88178 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4680g00005 3 443 WRKY Transcription Factor Family AT4G12020 31.567 3.19e-55 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4680g00005 - - pcin:129295832 706.442