Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4680g00003 ATGGGTGGTGCTGTAGTGGCAGATTTAACCAAGGTACTTGATTGGTTTGGAGAAGGAAGTAGAATTATTATCACATCAAGGGACATGCAAGTGCTGAAGAATGCTTTTACGACATTTTCAGCATATCATGTTCTGGATTTGAATTTTGAAGATGCTTTTCATCTCTTCAATTTGAAAGCATTCAAGCGAGATGAGCCATCTAAGGGTTACATGGAGTTATCAAAATCAGTAGTGAAATATTGTCACGGAAACCCATTAGCCCTAGTAGTGCTGGGTTGCTTCCTTTATGGCAGACAAAAAGAAGAGTGGGAAAGTGCTTTGGAAAAACTAAGTCAAGCTCCACCCAAGGACATTGTTGATGTTCTGAAGTTGAGTTTCGATGGACTTGATGACAAACAGCAAAATGTGTTTCTTGACCTGGCATTCTTAATCAAGCAAGGAGTTCATATTTCTTTGAACCTATTGAGACAATTATATTGTTCTTCTATGTATATTGAGATAAGTGTTCTAAGAGAAAAGTCCCTCGTTTCATTTAATGATCATAATGATTTCATTGAGATGCATGATCTTCTGAGGGAAATGGGCCTTGAAATTTCAAGCCAACAATTATTCTCTGGTCGTAAAACACATGTTCGACTATGGAGGCATGAGGGCATTTATCACTTTTTCCACAATGACCAGGCGATTGAGGCAATTCGATGCATGTCGTTGGATGCAAGCAAGATAGAAAGCATCACATTGACGGCTAGTAATTTTCGAAGGATGCATTATTTAATGTCCCTTCAAGTTTACAAGTCAGATTGGGGGAAGCCTTCAAAGTTGAATATTTGCGAACCGTTGGATTATCTTTCTAAAGAATTAAGGTTTCTTAGTTGGGCAGAATATCCACTACCATCTGTGCCATTACAATTTTGTGCTGAAAATCTCATTAAACTTCATTTGCCTGACAGTAATATCCAACAGCTTGGGGATCAGCAATTTCCAAATCTAAGGAGAATAAATCTACAGTATTCAAAAAATCTCAGGGCACTCCCAGATTTGTCTCAAACCCCTAAGATTGAAAGTATGATTCTTCATGGTTGCGGGAAGTTAGGCCAAATCCATTCTTCGACTATCCCGAAACAGAATGTCTATTTATTTATAGAAGATTGTGGGCCGATGCAGATAAATTTCATCTAG 1179 0.3817 MGGAVVADLTKVLDWFGEGSRIIITSRDMQVLKNAFTTFSAYHVLDLNFEDAFHLFNLKAFKRDEPSKGYMELSKSVVKYCHGNPLALVVLGCFLYGRQKEEWESALEKLSQAPPKDIVDVLKLSFDGLDDKQQNVFLDLAFLIKQGVHISLNLLRQLYCSSMYIEISVLREKSLVSFNDHNDFIEMHDLLREMGLEISSQQLFSGRKTHVRLWRHEGIYHFFHNDQAIEAIRCMSLDASKIESITLTASNFRRMHYLMSLQVYKSDWGKPSKLNICEPLDYLSKELRFLSWAEYPLPSVPLQFCAENLIKLHLPDSNIQQLGDQQFPNLRRINLQYSKNLRALPDLSQTPKIESMILHGCGKLGQIHSSTIPKQNVYLFIEDCGPMQINFI 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4680g00003 392 FunFam Disease resistance protein (TIR-NBS-LRR class) 48 130 - -
Pral4680g00003 392 Gene3D - 46 130 IPR042197 -
Pral4680g00003 392 Pfam NB-ARC domain 15 114 IPR002182 GO:0043531
Pral4680g00003 392 SUPERFAMILY "Winged helix" DNA-binding domain 117 222 IPR036390 -
Pral4680g00003 392 Gene3D Ribonuclease Inhibitor 226 391 IPR032675 -
Pral4680g00003 392 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 368 IPR044974 GO:0006952
Pral4680g00003 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 140 IPR027417 -
Pral4680g00003 392 SUPERFAMILY L domain-like 231 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4680g00003 Pral-Chr4680 69510 73001 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4680g00003 5 364 WRKY Transcription Factor Family AT5G45050 31.759 1.36e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4680g00003 - - pcin:129295832 479.944