Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4680g00001 ATGGAGTTATCAAAATCAGTAGTGAAATATTGTCACGGAAACCCGTTAGCCCTAGTAGTGCTGGGTTGCTTCCTCTACGGCCGACAAAAAGAAGAGTGGGAAAGTGCATTGGAAAAACTAACTCAAGCTCCACCAAAGGACATTGTTGATGTTCTGAAGTTGAGTTTCGATGGACTTGATGACAAACAGCAGAATATGTTTCTTGACCTAGCATTCTTAATCAAGCAAGGAGTTCGTATTTCTTTGAAGCTAATGAGACAATTATATTGCTCTTCTATGCATATTGAGATAAGTGTTCTTAGAGAAAAGTCCCTCATTTCATTTAATAATCATAATGACATCATTGAGATGCATGATCTTGTGAGGGAAATGGGTCTTGAAATTTCAAGCCAACAATTATTCTCTGGTCGTAAAATCCCTGTTCGACTATGGAGGCACGAGGACACTTACCACTTTTTCCACAATGACCAGGCAATTGAGGCAATTCGATGCATGTCGTTGGATGCAAGCAAGATAGAAAGCATCACATTGATGGCTAGTCATTTTCGAAGGATGCATTATTTAATGTCCCTTCAAGTTTACAAGTCAGATCGGGAAAAGCCTTCAAAGTTGAATATTTGTGAACCGTTGGATTATCTTTCTAAAGAATTAAGGTTTCTTAGTTGGGAAGAATATCCACTGCCATCTGTGCCATTACAATTTTGTGCTAAGAATCTCATTGAACTTAATTTGCCTGACAGTAATATCCAACAACTTTGGGATCAAGTACGTATAGTTTCTCATATGTCATAA 792 0.3801 MELSKSVVKYCHGNPLALVVLGCFLYGRQKEEWESALEKLTQAPPKDIVDVLKLSFDGLDDKQQNMFLDLAFLIKQGVRISLKLMRQLYCSSMHIEISVLREKSLISFNNHNDIIEMHDLVREMGLEISSQQLFSGRKIPVRLWRHEDTYHFFHNDQAIEAIRCMSLDASKIESITLMASHFRRMHYLMSLQVYKSDREKPSKLNICEPLDYLSKELRFLSWEEYPLPSVPLQFCAKNLIELNLPDSNIQQLWDQVRIVSHMS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4680g00001 263 Gene3D - 1 60 IPR042197 -
Pral4680g00001 263 SUPERFAMILY "Winged helix" DNA-binding domain 47 152 IPR036390 -
Pral4680g00001 263 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 253 IPR044974 GO:0006952
Pral4680g00001 263 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Pral4680g00001 263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 70 IPR027417 -
Pral4680g00001 263 Pfam Leucine Rich Repeat 238 254 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4680g00001 Pral-Chr4680 8329 10493 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4680g00001 2 257 WRKY Transcription Factor Family AT5G45050 32.000 1.74e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4680g00001 - - pcin:129291819 334.339