Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral467g00006 ATGAACTATGGATCCAATGCTCAACTCATACCAGAAGATGAAGTGAAAGTTCTAGAAACAATATCATCAAAGATAGGGAACTTGAATTGGAATGTGACCCCACGTTCTTGTGTCGGGGGAGGCTTCAAAAATGAGACCATTAGCACAACAAATAGCATCATAAGGAATGTAACATGCAATTGCAGCTTCTTAAATGGAAAAGTTTGTCATGTTACAAATATTGTTTTCACAGGTCTCAATTTATCTGGACTTTTACCAAGTGAATTTGGACTCCTTGCCTATCTGCAAGAACTACGTCTTAAGGGGAACCCAATTAGTGGTCCAATTCCAGACGAAATTGGTGAAATTACAACTTTAGAGGATTTAGATTTGAGAGATAGTCTATTGGAAGGGACTCTTCCTTCTAGTCTTGGAAAATTGAAGCAGCTACGCAAGTTGCATTTGGCGGGAACATCTATGGAAGGCCCCATTCCTACAACCATATCTTACTTAAGAAATTTGACTGCACTGGTGTTGAGAAATTGCTTCATCCATGATTCCATTCCAAATTATATTGGTAAAATGGAAAACTTAACTACTCTAGATTTGAGCTTCAACAAGTTGACCGGTAAAATCCCAAATAGTATAAGTAGCTTGACCTTCCTAAATTCCATGAGGCTAACTGAAAATTCTCTGACCGGAAAAATTCCTGATTGGATGTTGCAACGGCAATATGGTCATCTTGATTTATCTTACAACAATTTTTCGAAGACTTCTGCGACTAATTGTCGATACGAAAATTTATGTACTTGCCTAAAAAGGAGCCTTCCTTGTGGAGGAAAACCCAAATATCATTCATTGTTCATAAATTGTGGAGGACCACAAATTATTTATGAGGGGAATAAATACGAAGGTGACATCAGGCCTGAGCCTATCTCATTCTTTTGCCCTAGTGATGATAAATGGGCTTATAGCAGCACAGCAAGAGTAAAATACTATAATAAAATAACAACGAATAGATTTTCCCTCAACATTACTGGTCCTGACTTCTATCAAACAGCTCGCATTTCCCCTTTGTCTCTCAAGTACCATGGCCTCTGTATGATTAACGGAAATTACAACGTCAAGCTCTATTTTGCTGAGATTATGTATTCTCAGGATCAAGATTTCAATCATGTTGGAAGACGCATTTTTGATGTTTCAATCCAAGGTAGGAAATATTTGCATGATTTCAACATTATGAGGGAAGCCGGCGGCGTTGGTAAGGGCATTGTCAAGGACTTTAGTGTTGATGTTAATGATAACACCTTGGAGATTCATTTATACTGGGCTGAAAAAGGAACTACAAGCATTCCCAATGAAAACAATGGTGTATATGGACCTCTTATATCTGCTATTTCAGTCACCCCAAATTTCAAAATTCCATGGATTTTTGGTGGAGCCATTGCTGGAATTGTGGTTGGATCATGTGTGCTCCTCATCATACTAATAATAATATTCATCCTCCGAAAAATGGGCTTACTAGGTGTCAAAGATTCAAAAGACAAACAACTTTTAGATCTAAAAACGGGTTATTTCTCTTTAAAACAAATCAAAGATGCCACTAATAACTTTGCCCCAGAAAATAAGATTGGTGAAGGAGGTTTTGGGCCAGTGCACAAGGGTACACTATCAAATGGTGTTGTCATAGCTGTGAAACAGCTTTCCTCTAAATCAAAACAAGGGAATCGTGAATTTGTTAATGAAATTGGAATGATTTCTGCTTTGCAACACCCAAACCTCGTGAAGCTTTATGGATGTTGTGTTGAAGGAAATCAATTGTTGCTGATATATGAGTACATGGAGAACAATAGTCTTGCTAGTGCTCTTTTTGGTGGCCAAGGTCAAAAGATGCACTTGGACTGGCCTACAAGAATGAAGATATGCGTAGGAATAGCAAGAGGATTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATTGTGCATAGAGATATTAAGGCAACAAATGTCTTACTTGATAAAGATTTGAATGCCAAGATCTCAGATTTTGGATTAGCCAAGCTTGATGAAGATGAAAATACTCATATAAGCACAAGAATAGCAGGAACCATCGGTTATATGGCCCCTGAATATGCAATGCGAGGATGCTTAACTGATAAAGCAGATGTTTATAGTTTTGGAGTCGTCGCTTTAGAAATTGTCAGTGGAAAAAGTAACACAAGTTACAGGCCAAAAAAGGAGTTTGTTTACCTTCTTGATTGGGCCTATGTTCTTCAAGAGCAAGGAAACCTTCTTGAGTTGGTGGATCCAAGTCTTGGTTCAAGCTACTCCTCACAGGAAGCCATGAGAATGCTGGAGCTGGCACTCCTATGTACTAACCCATCTCCAACACTCAGGCCATCCATGTCCTCTATTGTCTACATGCTTGAAGGAAAGTTGCCAATCCAAGCCCTAACAATCAAACGTCGGGAGAGTGACCAACAGGTTGCCAGATTCAAGGCCTTAGAGATACAATCATCTCAAGAAAGCCATAGCCAAACCTTTAGTTCTTCTTCTACATCAAGATCACACGAAAATGTGAAGCAAAGGGTTGAAGCAACGGATAGCGCATCATCAAAATACAATTGTAGAAGTTAA 2616 0.3869 MNYGSNAQLIPEDEVKVLETISSKIGNLNWNVTPRSCVGGGFKNETISTTNSIIRNVTCNCSFLNGKVCHVTNIVFTGLNLSGLLPSEFGLLAYLQELRLKGNPISGPIPDEIGEITTLEDLDLRDSLLEGTLPSSLGKLKQLRKLHLAGTSMEGPIPTTISYLRNLTALVLRNCFIHDSIPNYIGKMENLTTLDLSFNKLTGKIPNSISSLTFLNSMRLTENSLTGKIPDWMLQRQYGHLDLSYNNFSKTSATNCRYENLCTCLKRSLPCGGKPKYHSLFINCGGPQIIYEGNKYEGDIRPEPISFFCPSDDKWAYSSTARVKYYNKITTNRFSLNITGPDFYQTARISPLSLKYHGLCMINGNYNVKLYFAEIMYSQDQDFNHVGRRIFDVSIQGRKYLHDFNIMREAGGVGKGIVKDFSVDVNDNTLEIHLYWAEKGTTSIPNENNGVYGPLISAISVTPNFKIPWIFGGAIAGIVVGSCVLLIILIIIFILRKMGLLGVKDSKDKQLLDLKTGYFSLKQIKDATNNFAPENKIGEGGFGPVHKGTLSNGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLLLIYEYMENNSLASALFGGQGQKMHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYMAPEYAMRGCLTDKADVYSFGVVALEIVSGKSNTSYRPKKEFVYLLDWAYVLQEQGNLLELVDPSLGSSYSSQEAMRMLELALLCTNPSPTLRPSMSSIVYMLEGKLPIQALTIKRRESDQQVARFKALEIQSSQESHSQTFSSSSTSRSHENVKQRVEATDSASSKYNCRS 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral467g00006 871 Gene3D Phosphorylase Kinase; domain 1 500 606 - -
Pral467g00006 871 FunFam Putative LRR receptor-like serine/threonine-protein kinase 607 814 - -
Pral467g00006 871 MobiDBLite consensus disorder prediction 830 850 - -
Pral467g00006 871 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 277 464 - -
Pral467g00006 871 Gene3D Transferase(Phosphotransferase) domain 1 607 829 - -
Pral467g00006 871 ProSiteProfiles Leucine-rich repeat profile. 190 212 IPR001611 GO:0005515
Pral467g00006 871 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 122 842 - -
Pral467g00006 871 CDD STKc_IRAK 537 804 - -
Pral467g00006 871 Gene3D - 278 464 - -
Pral467g00006 871 MobiDBLite consensus disorder prediction 830 871 - -
Pral467g00006 871 ProSiteProfiles Protein kinase domain profile. 531 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral467g00006 871 SMART serkin_6 531 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral467g00006 871 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 134 229 - -
Pral467g00006 871 Pfam Malectin domain 280 459 IPR021720 -
Pral467g00006 871 Pfam Leucine Rich Repeat 190 212 IPR001611 GO:0005515
Pral467g00006 871 Pfam Protein tyrosine and serine/threonine kinase 534 800 IPR001245 GO:0004672|GO:0006468
Pral467g00006 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Pral467g00006 871 Gene3D Ribonuclease Inhibitor 46 262 IPR032675 -
Pral467g00006 871 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 502 606 - -
Pral467g00006 871 SUPERFAMILY L domain-like 65 251 - -
Pral467g00006 871 SUPERFAMILY Protein kinase-like (PK-like) 515 803 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral467g00006 Pral-Chr467 127054 137410 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral467g00006 3 852 Receptor kinase-like Gene Family AT1G53440 51.799 0.0 918
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral467g00006 PK_Tyr_Ser-Thr 8.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral467g00006 - - gmx:100784920 998.423