Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4679g00068 ATGCTCCAAAAAGCTTTATCGATCCTATTGGGAGTATCAATTTCTAAAGCCATCAGACTCATCTCTCGTTCGCGTAATGGTAACCAACCTGTTGCTATTGCTGCTAGCTCTGAAGACGATGTTATTTTAACTTCTCCTCCTGCTACCAAGTATGATGTGTTCCTTAGCTTTAGAGGAGAAGACACTCGCCACAATTTTGCAAGTTATCTTTACAAAGGGCTTCGAAATGCGGGCATTCACACTTTTATGGATCACGAACTTCGAAAAGGAGAATCAATCTCACCGATTCTTCAAAGAACAATAGGGGAATCAGAAATATCTGTGATTATTTTCTTTGAGAATTATGCTTCTTCAACTTGGTGTCTAGATGAGCTTGTTCACATATTAGAATGCAAGCGTAAATTTGGAAGGGTTGTGATACCTGTTTTCTATAACGTAGATCCTTCAAGCATACGCAAACAAAATGGGAATTTTGGAAAAGGATTTGATGTATTGGAGCAAAGATTTAAAGACAACCCAGAAGCATTGCAAAAGTGGAGAAATGCTTTAATCCAATCTACAAATCTCTCTGGATGGGATTCCCACAGTACAAGACCTGAATTCAAACTTATTGAAGAGATTGTCAAGGATATTTTGAGAAAGTTGAACTATGCGTCATCATCTCATCTTGAAGGACTCATTGGTATTGCTCGACATTTTAGAAACATTCAGAGGCTTCTAATTGAGGCCCGCATTGTGGGAATATGGGGTATGGGCGGTGCTGGTAAGACCACACTTGCTAAAGCTATACTTCAGGGGTTGAAAGCTCAATTTGATGCTTTCTCCTTTATTGAAAATGTCAAAGAGCAATTAAAAAGGATTAGCTTAGAGAAAAAAATTCTTCTTATACTTGATGATGTGGACAATTCAATAGTAGCAGCAGATTTAACCAAGGTACTTGATTGGTTTGGAGAAGGAAGTAGAATTATTATCACATCAAGGGACATGCAAGTGCTGAAGAATGCTTCAGCAACATCTTCAACATATCACGTTCCGGATTTGGATTTTGAAGGTGCTTTTCATCTCTTCAATTTGAAAGCATTCAAGCGAGATGAGCCATCTAAAGGTTACATGGAGTTATCAAAATCAGTAGTGAAATATTGTCACGGAAACCCATTAGCCCTATTAGTGCTGGGTTGCTTCCTCTATGGCAGACAAAAAGAAGAGTGGGAAAGTGCTTTGGAAAAACTAAATCAATCTCCACCCAAGGACATTGTTGATGTTTTGAAGTTGAGTTTCGATGGACTTGATGACAAACAACAAAATGTGTTTCTTGACCTAGCATTCTTAATCAAGCAAGGAGTTCATATTTCTTTGAACCTATTGAGACAATTATATTGCTCTTCTATGCATATTGAGATAAGTGTTCTAAGAGAAAAGTCCCTCATTTCATTTAATAATCATAATAATTTCATTGAGATGCATGATCTTCTGAGGGAAATGGGCCTTGAAATTTCAAGCCAACAATTGTATTCTAGTCGCAAAACCCTTGTTCGACTATGGAGGCACGAGGACATTTATCACTTTTTCCACAATGACCAGGCGGTTGAGGCAATTCGATGCATGTCATTGGATGCAAGCAAGATAGAAAGCATCACATTGATGGCTAGTCATTTTCGAAGGATGCATTATTTAATGTCCCTTCAAGTTTACAAGTCAAATCAGGGAAAGCCTTCAAAGTTGAATATTTGCAAATCGTTGGATTATCTTTCTAAAGAATTAAGGTTTCTCAATTGGGAAGAATATCCACTGCCATTTGTGCCATTACAATTTTGTGCTAAGAATCTCATTGAACTTGAATTGCCTAACAGTAATATCCAACAGCTTTGGGATCAGGTGATGGTGTGCAGCAAGATCATGTATGGCATTGGATTTAAGCATGTGAAAATGCCATTGAAAGAGACAGCAGAAGTCATGACAATGGGAATACAAAGTTTGGCGACTTTACTTCCATTTGTGAGGATAGTTGAATGTGTCTGCTTTGCAATTACTGTGAGGATGAGGGGTGATAGAGGCAAAAGGGGTGTGGAAGATGATAAAGAAGAGGATGAGGATAAGAGAGAAATGATTAGTGAGAATGAAAGAGAAATGAGTAGTAAGGGAGATCAAGTAGGAGAGATGACATTATTATTAAAGGAAGATGAACAAGAAGAGGCCGATGAGGATGATAGTAAGATGGACGATACATTATTAACAACACTACTTATTCCCAACACCATCCCTCGCTGGTCACTATTGATTCGACTGACATTAAAAGAGGGTGATAGTATTGGGAATAATAATGCAGGTTGTAGCAGCATCCCTCAAGTTTCAATATTCCGCAAATCACTTAATGAAGATTGCAGGGCAAGGATTCAGCCTCTTTTAGGAGTACAACTCTCTTCCCCAATATCCCCTTTACCTCATCATTCTTTCGGAGTCTTTTATAACTACTCGAGGAGCACGCTAGAACATCCTCATTTTCTTGTTTTCGAAAGTGGATACAGGTCAAGTGATTATTTCTGTGGTAATGACTTATTTGTTCGCTTTGGGAACTACTGGTGA 2583 0.3833 MLQKALSILLGVSISKAIRLISRSRNGNQPVAIAASSEDDVILTSPPATKYDVFLSFRGEDTRHNFASYLYKGLRNAGIHTFMDHELRKGESISPILQRTIGESEISVIIFFENYASSTWCLDELVHILECKRKFGRVVIPVFYNVDPSSIRKQNGNFGKGFDVLEQRFKDNPEALQKWRNALIQSTNLSGWDSHSTRPEFKLIEEIVKDILRKLNYASSSHLEGLIGIARHFRNIQRLLIEARIVGIWGMGGAGKTTLAKAILQGLKAQFDAFSFIENVKEQLKRISLEKKILLILDDVDNSIVAADLTKVLDWFGEGSRIIITSRDMQVLKNASATSSTYHVPDLDFEGAFHLFNLKAFKRDEPSKGYMELSKSVVKYCHGNPLALLVLGCFLYGRQKEEWESALEKLNQSPPKDIVDVLKLSFDGLDDKQQNVFLDLAFLIKQGVHISLNLLRQLYCSSMHIEISVLREKSLISFNNHNNFIEMHDLLREMGLEISSQQLYSSRKTLVRLWRHEDIYHFFHNDQAVEAIRCMSLDASKIESITLMASHFRRMHYLMSLQVYKSNQGKPSKLNICKSLDYLSKELRFLNWEEYPLPFVPLQFCAKNLIELELPNSNIQQLWDQVMVCSKIMYGIGFKHVKMPLKETAEVMTMGIQSLATLLPFVRIVECVCFAITVRMRGDRGKRGVEDDKEEDEDKREMISENEREMSSKGDQVGEMTLLLKEDEQEEADEDDSKMDDTLLTTLLIPNTIPRWSLLIRLTLKEGDSIGNNNAGCSSIPQVSIFRKSLNEDCRARIQPLLGVQLSSPISPLPHHSFGVFYNYSRSTLEHPHFLVFESGYRSSDYFCGNDLFVRFGNYW 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4679g00068 860 Gene3D - 48 222 IPR035897 -
Pral4679g00068 860 SUPERFAMILY Toll/Interleukin receptor TIR domain 46 192 IPR035897 -
Pral4679g00068 860 PRINTS Disease resistance protein signature 381 395 - -
Pral4679g00068 860 PRINTS Disease resistance protein signature 245 260 - -
Pral4679g00068 860 FunFam Disease resistance protein (TIR-NBS-LRR class) 47 217 - -
Pral4679g00068 860 Gene3D - 275 344 IPR027417 -
Pral4679g00068 860 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51 642 IPR044974 GO:0006952
Pral4679g00068 860 Pfam NB-ARC domain 272 415 IPR002182 GO:0043531
Pral4679g00068 860 SUPERFAMILY "Winged helix" DNA-binding domain 417 522 IPR036390 -
Pral4679g00068 860 ProSiteProfiles TIR domain profile. 49 215 IPR000157 GO:0007165
Pral4679g00068 860 MobiDBLite consensus disorder prediction 685 715 - -
Pral4679g00068 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 440 IPR027417 -
Pral4679g00068 860 SMART till_3 50 189 IPR000157 GO:0007165
Pral4679g00068 860 Pfam TIR domain 50 222 IPR000157 GO:0007165
Pral4679g00068 860 Gene3D - 347 430 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4679g00068 Pral-Chr4679 883251 888198 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4679g00068 227 623 WRKY Transcription Factor Family AT5G45050 33.333 1.65e-54 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4679g00068 - - pcin:129286024 756.518