Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4679g00053 ATGAGTGATGAACAAATAGAGACTCTTAGAGTGCAAATAGCAGCATATGCCTTCATATGTGAGAACCTTGCTGATATGTACAGCAGGCTTACCCTCCACCAACTTCAGGATCTTCCACTTCCAGGTCTCTATATCGAGCCCTTGATGCTGTACGGTGGCCAAAGATGGAGTAGCAGAAGGCGATGGGCTCCGACACGGAACCAGCTTGAGATTCTGGAGAGTATATTCGAGGAAGGCGGCGGAGCTCATCCGAGCAAGCAGAAGATCAAGGACATTACGGCGGTGCTGAGCCACCATGGCCAGATTTCTGAGGCAAATGTGTACACTTGGTTCCAGAACCGGCGTGCTAGGTTGAAGAGGAAGTCGCAGAACAATAATGCAGAAGCACTTGATCGTCGTCATCATAATAACCATCCACAAGCCATGATGAAGATGATTCCAGTTGATCAGTTAGGATCGACCAAAAGAAGGCCTTGCATTAAAATTGCTTTGGTTTCAAGGAAAGGGAATAATGCTGCTGATTTTGTGGCAGCTTGTGCACAAAGAGGGATGGGGTCCAATGGATTATTAAGTGTAGCACCGTCATCAGATTTTGTGAGCTGA 603 0.471 MSDEQIETLRVQIAAYAFICENLADMYSRLTLHQLQDLPLPGLYIEPLMLYGGQRWSSRRRWAPTRNQLEILESIFEEGGGAHPSKQKIKDITAVLSHHGQISEANVYTWFQNRRARLKRKSQNNNAEALDRRHHNNHPQAMMKMIPVDQLGSTKRRPCIKIALVSRKGNNAADFVAACAQRGMGSNGLLSVAPSSDFVS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4679g00053 200 Gene3D - 58 129 - -
Pral4679g00053 200 Coils Coil 113 133 - -
Pral4679g00053 200 SMART HOX_1 57 125 IPR001356 GO:0003677
Pral4679g00053 200 ProSiteProfiles 'Homeobox' domain profile. 55 121 IPR001356 GO:0003677
Pral4679g00053 200 SUPERFAMILY Homeodomain-like 55 123 IPR009057 -
Pral4679g00053 200 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 132 IPR044559 GO:0003700
Pral4679g00053 200 CDD homeodomain 59 122 IPR001356 GO:0003677
Pral4679g00053 200 Pfam Homeodomain 59 120 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4679g00053 Pral-Chr4679 720438 723784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4679g00053 1 121 Wox Gene Family AT4G35550 59.016 1.98e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral4679g00053 Homeodomain 2.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4679g00053 - - pcin:129319605 215.698