Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4679g00029 ATGTTAAAAACAGTGGCGTCGGGACTTTCAATTTTTTTCCTCCTCAAATGTGTATCTGCAACAGACAATGAATTTCCCAGATGTAACTGTGATGATGAGGCCAGCTTGTGGACTATTGAGAGTATTCTGGAGTGCCAGAGAGTCAGCGATTTGTTGATTGCGGTGGCCTACTTCTCCATACCCATTGAGCTGCTTTGTTTTATCAGTTGCGCGAATGTCCCATTCAAATGGGTTCTCGTTCAGTTTATTGCCTTCATTGTACTATGTGGATTGACACATTTGCTGAATGCATGGACTTATGGTCGTCATTCTTTCCAACTTATGGTGGCACTTACAGTATTCAAAACTCTTACGGCTTTGGTATCATGTGCCACCGCGATTACTCTCATGACTCTCATTCCTTTACTTCTTAAAGTGAAGGTCAGAGAATTAATGCTGAGGAAAAAGACCTCCGAACTTGGACGAGAGGTTGGTCTTATTATGAGGCAGAAGGAAGCTGCAAAACATGTAAGGATGCTCACTCGACAGATTCGCAAGTCTCTTGATAGGCATACTATTTTGTACACCACCCTTGTGGAGCTGTCTGAAACTCTTGGTTTGCAAAATTGTGCAGTCTGGATGCCTAATTTCGATAAAACAGAGATGAACCTCACTCATGAATTGAATGAGAGGAATCTTAGTTCTTCTATACCCATTACAGATCCAGATGTTGTGAGAATTAAGGCAAGCGATGGAGTAAATATTCTTAGCCCTGTCTCAGCACTTGCTGCTGCCAGCAGTGGAAATTCTTCTGAGGTAGGACCAGTGGCTGCAATTCGGATGCCGATGCTTCGGATTTGCAATTTCAAAGGTGGAACACCTGAGTTAAGGCAGGCATGTTATGCAATATTGGTTCTGATTCTTCCCGGTGGAGAGCCAAGATCTTGGGGCAATCAGGAGCTGGAAATAGTTAAAACAGTTGCTGATCAGGTTGCTGTAGCTCTCTCTCATGCTGCAATTCTTGAAGAGTCCCAACTCATGAGAGAGAAATTGGAGGAGCAAAATCGAATTCTACAACAGGCACAAAGAAATGCTTTGATGGCGAGTCAGGCAAGAAACTTATCTCAGAAGGTCATGAGTGATGGAATGAGAAGACCGATGCACTCAATTTTGGGTTTGCTTTCAATTATACAAGATGAGAGTTTGAAAAGTGAACAGAAACTCATTGTGGATTCAATGCTGAGAACCAGCAATGTCCTATCAAACTGGATAAATGATGCCATGAACATTTCAGCGAAGGATGATGGGGGATTTCCATTGGAGATGAGATCTTTTGGGTTACATGCTATAATAAAAGAAGCAGCATGCCTTGCCAAGTGTCTTTGTGTTTATAGGGGCTTTGGTTTTAAAATTGAGTGTGAGAAGTCTTTGCCTGACAATGTTATGGGTGATGAGAGGAGGGTTTTTCAGGTGATTCTACATATGGTTGGGAACTTATTGGATGGAAATAACAGGGGAGGGATTCTTGTACTTCGTGTTCTTGCAGAAAGAGGAAGTCAGGAAAGAAATGACCATGGGTGGACAACTTGGAGACCAAGCTCATCTAGTGGGGATGTACATATTAGATTTGAGATAGGGATCAACAGAAGCAATTATGAATTGGAGAGTTCACGTTCTTTAGGAGTGGGCAGTAGGACATATTCTGGTTGTAGAGATGAGGTCAGGTTGAGCTTCAGCATTTGCAAGAGGATCGTTCAGTTGATGCAAGGGAACATATGGTTTGTACCAAATACCTTAGGTTATCCTCAAACCATGGCCCTTGTTCTTCGGTTTCACTTACGACAGTCTATTTCCATTTTCATCTCTGAGCCTGGTGAACCCTCTGAGCGCACAGATTCTAATTCTTTGTTCAGAGGTCTGCAAGTCTTGTTGGCTGACAATGATGATATAAATAGAGCTGTGACCCAAAAGTTGCTTCAGAAGCTAGGTTGTGTCGTAACTTCAGTTTCTTCAGGATTTGAATGCCTTGCTGTCATTGGATCTGCTGGATCTTCTATTCAAGTCGTTCTTTTGGATCTTCATATGCCCGAGTTAGATGGCTTTGAAGTTGCTACAAGGATTCGGAAATTTAGAAGCCGAAATTGGCCAATGATTGTTGCCTTGACTGCAAGTGCCGATGAAGATTTGCATGAAAGACGTATGCAAATTTGTATCAATGGAGTTATAAGAAAGCCCGTTATGTTGAAGGAAATTTCCAGTGAACTTAGGAGGATCCTGACGCATGCACGGAAGTGA 2274 0.4239 MLKTVASGLSIFFLLKCVSATDNEFPRCNCDDEASLWTIESILECQRVSDLLIAVAYFSIPIELLCFISCANVPFKWVLVQFIAFIVLCGLTHLLNAWTYGRHSFQLMVALTVFKTLTALVSCATAITLMTLIPLLLKVKVRELMLRKKTSELGREVGLIMRQKEAAKHVRMLTRQIRKSLDRHTILYTTLVELSETLGLQNCAVWMPNFDKTEMNLTHELNERNLSSSIPITDPDVVRIKASDGVNILSPVSALAAASSGNSSEVGPVAAIRMPMLRICNFKGGTPELRQACYAILVLILPGGEPRSWGNQELEIVKTVADQVAVALSHAAILEESQLMREKLEEQNRILQQAQRNALMASQARNLSQKVMSDGMRRPMHSILGLLSIIQDESLKSEQKLIVDSMLRTSNVLSNWINDAMNISAKDDGGFPLEMRSFGLHAIIKEAACLAKCLCVYRGFGFKIECEKSLPDNVMGDERRVFQVILHMVGNLLDGNNRGGILVLRVLAERGSQERNDHGWTTWRPSSSSGDVHIRFEIGINRSNYELESSRSLGVGSRTYSGCRDEVRLSFSICKRIVQLMQGNIWFVPNTLGYPQTMALVLRFHLRQSISIFISEPGEPSERTDSNSLFRGLQVLLADNDDINRAVTQKLLQKLGCVVTSVSSGFECLAVIGSAGSSIQVVLLDLHMPELDGFEVATRIRKFRSRNWPMIVALTASADEDLHERRMQICINGVIRKPVMLKEISSELRRILTHARK 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4679g00029 757 CDD HATPase_ETR2_ERS2-EIN4-like 470 602 - -
Pral4679g00029 757 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 25 756 - -
Pral4679g00029 757 Pfam GAF domain 182 328 IPR003018 GO:0005515
Pral4679g00029 757 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 418 594 IPR036890 -
Pral4679g00029 757 Coils Coil 334 364 - -
Pral4679g00029 757 CDD REC_ETR-like 633 748 - -
Pral4679g00029 757 Gene3D - 330 427 - -
Pral4679g00029 757 FunFam Ethylene receptor 631 755 - -
Pral4679g00029 757 PIRSF Ethylen_sen_hybr_HK 1 757 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Pral4679g00029 757 Gene3D - 621 756 - -
Pral4679g00029 757 FunFam Ethylene receptor 4 331 425 - -
Pral4679g00029 757 Gene3D - 161 329 IPR029016 -
Pral4679g00029 757 SMART gaf_1 182 338 IPR003018 GO:0005515
Pral4679g00029 757 SUPERFAMILY CheY-like 630 753 IPR011006 -
Pral4679g00029 757 SMART REC_2 633 748 IPR001789 GO:0000160
Pral4679g00029 757 ProSiteProfiles Response regulatory domain profile. 634 752 IPR001789 GO:0000160
Pral4679g00029 757 Pfam Response regulator receiver domain 635 747 IPR001789 GO:0000160
Pral4679g00029 757 Gene3D - 428 608 IPR036890 -
Pral4679g00029 757 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 350 429 IPR036097 GO:0000155|GO:0007165
Pral4679g00029 757 SUPERFAMILY GAF domain-like 185 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4679g00029 Pral-Chr4679 430968 436585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4679g00029 22 755 Miscellaneous Gene Families AT3G04580 56.913 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral4679g00029 GAF 7.5e-12 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4679g00029 K14509 - gmx:100787425 1174.07