Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4678g00018 ATGTATGATGTAGTGAACATATTGGAGAGCGTTGGAATTGTCGCAAGAAAAGGGAAAAATCTGTACCTATGGAAAGGTTTCAGAGAAATTCCTCGAGCTTTGAACGAGCTTAAGGAGGAAGGTATGAGAGAAAAATTTGATGCATCCTACTGCAGGTCAGCTGAAACATCAAAGAACAAAGAAAGCGGTGGCTCTGAAACTAAAACTGGTCCTTTGGCAGCGGCATTGCGCAAAACTGACGGCTGCAGAAGAGACAAATCTATGGCACTTTTGACCGAGAATTTCATAAAGCTCTTCCTCTGTTCAGATGTTGAAATTATCTTGCTTGAAGATGCTGCAAAGGTAATGCCGGGTGATGCCCAGAATTCAACTGCCTTGAGAACAAAAGTCAGGCGTTTATATGACATAGCGAATGTCCTTTCATCAATCAATCTGATCGAGAAGACGAATCATCCGAGTATAGGAAAACAGCATATAGGTGGTTGGGAGGGAAAGCCAGTAGAGAATCTGATGGCATGTTGGATCAAAGTGCATCCAGGAAGAGAGTGTTTGGTGCGGAAATTACAAATTACAGTCTGA 579 0.4249 MYDVVNILESVGIVARKGKNLYLWKGFREIPRALNELKEEGMREKFDASYCRSAETSKNKESGGSETKTGPLAAALRKTDGCRRDKSMALLTENFIKLFLCSDVEIILLEDAAKVMPGDAQNSTALRTKVRRLYDIANVLSSINLIEKTNHPSIGKQHIGGWEGKPVENLMACWIKVHPGRECLVRKLQITV 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4678g00018 192 FunFam E2F transcription factor-like E2FE 78 165 - -
Pral4678g00018 192 PANTHER TRANSCRIPTION FACTOR E2F 2 165 IPR015633 GO:0000978|GO:0006357
Pral4678g00018 192 Gene3D - 78 164 IPR036388 -
Pral4678g00018 192 Gene3D - 1 28 IPR036388 -
Pral4678g00018 192 SMART E2F_TDP_2 83 164 IPR003316 GO:0005667|GO:0006355
Pral4678g00018 192 Pfam E2F/DP family winged-helix DNA-binding domain 1 26 IPR003316 GO:0005667|GO:0006355
Pral4678g00018 192 Pfam E2F/DP family winged-helix DNA-binding domain 85 154 IPR003316 GO:0005667|GO:0006355
Pral4678g00018 192 SUPERFAMILY "Winged helix" DNA-binding domain 83 153 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4678g00018 Pral-Chr4678 102339 104219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4678g00018 1 152 E2F-DP Transcription Factor Family AT3G01330 52.903 1.24e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Pral4678g00018 E2F_TDP 2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4678g00018 - - lang:109346387 208.764