Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4678g00017 ATGTATGATGTAGTGAACATATTGGAGAGCGTTGGAATTGTCGCAAGAAAAGGGAAAAATCTGTACCTATGGAAAGGTTTCAGAGAAATTCCTCGAGCTTTGAACGAGCTTAAGGAGGAAGGTATGAGAGAAAAATTTGATGCATCCTACTGCAGGTCAGCTGAAACATCAAAGAACAAAGAAAGCGGTGGCTCTGAAACTAAAACTGGTCCTTTGGCAGCGGCATTGCGCAAAACTGACGGCTGCAGAAGAGACAAATCTATGGCACTTTTGACCGAGAATTTCATAAAGCTCTTCCTCTGTTCAGATGTTGAAATTATCTTGCTTGAAGATGCTGCAAAGCAAAAGTCAGGCGTTTATATGACATAG 369 0.4146 MYDVVNILESVGIVARKGKNLYLWKGFREIPRALNELKEEGMREKFDASYCRSAETSKNKESGGSETKTGPLAAALRKTDGCRRDKSMALLTENFIKLFLCSDVEIILLEDAAKQKSGVYMT 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4678g00017 122 Pfam E2F/DP family winged-helix DNA-binding domain 1 26 IPR003316 GO:0005667|GO:0006355
Pral4678g00017 122 Gene3D - 1 28 IPR036388 -
Pral4678g00017 122 Gene3D - 78 119 IPR036388 -
Pral4678g00017 122 PANTHER TRANSCRIPTION FACTOR E2F 2 116 IPR015633 GO:0000978|GO:0006357
Pral4678g00017 122 MobiDBLite consensus disorder prediction 52 66 - -
Pral4678g00017 122 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4678g00017 Pral-Chr4678 102333 103942 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4678g00017 1 114 E2F-DP Transcription Factor Family AT3G01330 50.427 3.14e-31 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Pral4678g00017 E2F_TDP 1.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4678g00017 - K09391 lang:109346387 151.754