Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4676g00010 ATGAGGCCTGCTTTATTCTTGCTAGGTTGCGTGTTGCTTTTTGCTACTCTTGATGTTGGACAAGGGGGCAAATTAAGGAAGAAATTCTACCGAAGAACGTCTTGCCCTCAAGCTGAGGACATCATCAAAACAAGAACCACACAGCTTGTCTCTTCTAACCCTGCTTTGCCAGCCCAGTTGCTGAGAATGCAATTTCATGACTGCTTTGTTAGGGGTTGTGATGCATCTGTCCTGCTGAACTCGACTGCTAATAACACTGCAGAACGGGAAGCAATCCCAAATCAGACTTTGAAAGGCTTTGAAGCTATTGATGACATAAAAGCAACCGTCGAGGCCAAATGCCCAGGAGTTGTTTCCTGCGCTGACATCATCGCATTGGCCACTAGGGACGCCGTTTCCATCCCTTTTAAGAAACCTCTATGGGAAGTGCTTACTGGCAGAAGAGATGGGAGAGTATCGAAAAGCCAAGAAGCATTGGTCAATATTCCACCACCATTCTTCAACTTCACTCAACTCAGGGCCAGCTTCGCCAGGAAAGGCCTGACCTTGCACGAGCTGGTGGTGTTGTCGGGCGCACACACCATCGGAATAGCTCACTGCAACTCCTTCAGCAACAGGCTCTTCAACTTCACCGGAAAAGGCGACCAGGACCCTTCTCTGGACCCCAAATACGCCGAGTTCCTCAAGTCCAAATGCAAGGGCCTCAGTGACAATACCACCATCGTGGAAATGGATCCCAAAAGCTCCACCACATTTGACTCTGACTATTACTCCAGCCTTCTGAAGAACAAGGGATTGTTCGAGTCTGATGCTGCACTTCTGACCAACAAGCAGGCCAAAAAGACTGTCCATGAATTGGTTGACCAAGAGGATTTCTTCACCGAGTTCTCGCAGGCCATGAAGAGGCTCGGAAACATTGAGGTTCTTGCCGGCACCAGTGGAGAAATTAGGAAGAAATGCTGGGTTAGGAGAAAAGTAAGACCGTTAAGGAGGTTTACCGTTTCCAATATGAGGTCTACATTATGCTTACTGGCTTATCTGCTACTTTTTGCTTCTCTTGTGGTTGGACAAGGGGACAAACTAAGGAAGAACTTCTACCGAAGAGCTTCTTGCCCTCAAGCTGAGGACATCATCAAAACAAGAACCACACAGCTTGTGTCTTCTAACCCTGCTTTGCCAGCCCAGTTACTGAGATTGCACTTTCATGACTGCTTCGTCAGGGGTTGTGATGCATCAGTCCTGCTGAGCTCGACTGCTAATAACACTGCAGAAAGGGACTCAATCCCAAATCTGACTTTGAAAGGCTTCGAAGCCATCGATGACATAAAAGCAACCGTCGAGGCGCAATGCCCAGAAGTTGTTTCCTGCTCAGACATCCTCGCACTGGCCACTAGAGACGCCGTCTCCATCCCGTTTAAGAACCCTCTATGGGATGTGCCTACTGGTAGAAGAGATGGGAGAGTATCCATAAGCCAAGAAGCATTGATCAACATTCCAGCACCGTTCTTCAACTTCACTCAGCTCAGAACCATCTTCACCAGAAAAGGCCTCACCTTGCACGAGCTTGTGGTGTTGTCAGGGGCCCACACCATCGGAACAGCTCACTGCAACACCTTCAGCCGGAGGCTCTTCAACTTCACAGGAAAAGGCGACCAGGACCCTTCTCTGGACCCCAAATACGCCGAGTTCCTCAAGTCCAAATGCAAGGGCCTCAGTGACACCACCACCGCCGTGGAAATGGATCCAAACAGCTCGACCACATTTAACTCTAGCTATTATTCCAACCTTGTCCAGAACAAGGGACTGTTCCAGTCAGATGCTGCCCTTTTGACCGACAAGCAGGCCACAAAGACTGCCAATGAACTGATTGACGAAAAGAGTTTCCTCACCGAGTTCGCGCAGGCCATGAAGAGGCTCGGAAATATTGAGGTTCTCACCGGCAACAGTGGAGAAATTAGGAAGAAATGCTCGGTTGTTAACTCTTAA 1986 0.4889 MRPALFLLGCVLLFATLDVGQGGKLRKKFYRRTSCPQAEDIIKTRTTQLVSSNPALPAQLLRMQFHDCFVRGCDASVLLNSTANNTAEREAIPNQTLKGFEAIDDIKATVEAKCPGVVSCADIIALATRDAVSIPFKKPLWEVLTGRRDGRVSKSQEALVNIPPPFFNFTQLRASFARKGLTLHELVVLSGAHTIGIAHCNSFSNRLFNFTGKGDQDPSLDPKYAEFLKSKCKGLSDNTTIVEMDPKSSTTFDSDYYSSLLKNKGLFESDAALLTNKQAKKTVHELVDQEDFFTEFSQAMKRLGNIEVLAGTSGEIRKKCWVRRKVRPLRRFTVSNMRSTLCLLAYLLLFASLVVGQGDKLRKNFYRRASCPQAEDIIKTRTTQLVSSNPALPAQLLRLHFHDCFVRGCDASVLLSSTANNTAERDSIPNLTLKGFEAIDDIKATVEAQCPEVVSCSDILALATRDAVSIPFKNPLWDVPTGRRDGRVSISQEALINIPAPFFNFTQLRTIFTRKGLTLHELVVLSGAHTIGTAHCNTFSRRLFNFTGKGDQDPSLDPKYAEFLKSKCKGLSDTTTAVEMDPNSSTTFNSSYYSNLVQNKGLFQSDAALLTDKQATKTANELIDEKSFLTEFAQAMKRLGNIEVLTGNSGEIRKKCSVVNS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4676g00010 661 ProSiteProfiles Plant heme peroxidase family profile. 360 660 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 SUPERFAMILY Heme-dependent peroxidases 30 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 FunFam Peroxidase 499 639 - -
Pral4676g00010 661 FunFam Peroxidase 163 303 - -
Pral4676g00010 661 Gene3D Peroxidase, domain 2 163 303 - -
Pral4676g00010 661 ProSitePatterns Peroxidases proximal heme-ligand signature. 521 531 IPR019793 -
Pral4676g00010 661 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Pral4676g00010 661 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 Gene3D - 28 321 - -
Pral4676g00010 661 SUPERFAMILY Heme-dependent peroxidases 366 660 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 PANTHER PEROXIDASE 25-RELATED 13 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 FunFam Peroxidase 364 501 - -
Pral4676g00010 661 Pfam Peroxidase 46 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 Pfam Peroxidase 382 621 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 PRINTS Haem peroxidase superfamily signature 454 471 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 PRINTS Haem peroxidase superfamily signature 473 485 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 PRINTS Haem peroxidase superfamily signature 581 596 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 PRINTS Haem peroxidase superfamily signature 521 536 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 PRINTS Haem peroxidase superfamily signature 393 407 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 FunFam Peroxidase 28 171 - -
Pral4676g00010 661 Gene3D Peroxidase, domain 2 499 640 - -
Pral4676g00010 661 CDD secretory_peroxidase 360 659 IPR033905 GO:0004601|GO:0042744
Pral4676g00010 661 CDD secretory_peroxidase 24 322 IPR033905 GO:0004601|GO:0042744
Pral4676g00010 661 PRINTS Plant peroxidase signature 434 447 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 PRINTS Plant peroxidase signature 579 594 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 PRINTS Plant peroxidase signature 595 612 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 PRINTS Plant peroxidase signature 634 647 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 PRINTS Plant peroxidase signature 371 390 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 PRINTS Plant peroxidase signature 520 532 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 PRINTS Plant peroxidase signature 473 488 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 PRINTS Plant peroxidase signature 395 415 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 PRINTS Plant peroxidase signature 453 463 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4676g00010 661 Gene3D - 365 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4676g00010 Pral-Chr4676 85807 93494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4676g00010 342 661 Peroxidase AT1G05260 52.599 4.74e-113 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4676g00010 - - pcin:129301853 1087.79