Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4676g00001 ATGAATACTTGTCATAAATTTGGAGGAAGAACCCGAAAATTTTTTGCCATTTCCCTTTGTGCAAGAAGGTGGAGGTGCGTGGGTCTGGAATTGCGGTCTGGAGAAATGAAGGAGAAGGCAGATTCCCCAGTTGGGGTTCTTGAGGACTATTTTAGGAGCTCAGAATCAGACACAAGTTCTCCCAAGGAACCCACCATAGATTCTGAGGCTCAAGATAAGTCAAAATTTGCTTCCAAATGGCGTGGATTTCTCCAAAATCTGACGAACAGGTCTAAAAAACCTGCGCCCACCATGCATCCTCCTCTCAGCGTCCTCAAGCTGTCTAAGAGAATGAGCAGAAGCATGAGAGAGACTATATTTCCAAGTTCCCGCTTAGGTGCAGATTCGTCTCTCCACAATTCACCATGGAAGATCTTCACTCATAAGGAAATTCTGCTTGCAACCAGTTCCTTCAGTCAAGAAAACCTTATTGGGAAAGGTGGGTACGCTGAAGTCTACAAAGGGTGCTTGCCAAATGGTCAGCTAGTAGCAATTAAGAAGCTGACACGTGGATCCCAAGATGAGATTATTGGTGACTTCTTATCAGAACTCGGCATAATGGCACATGTTAATCATCCCAATACTGCAAAGCTAGTAGGCTATGGCGTTGAAGGAGGCATGCACCTTGTTCTTGAATTATCAGAAAAAGGAAGCTTAGCTTCTGTGCTTCACGGCTCCAAGGAAAACCTTCCATGGTGTATTAGGTATAGCATTGCTTTAGGAACAGCCAAGGGTATATTATATCTCCACGAGGGATGTCAAAGAAGAATTATCCACAGAGATATAAAGGCAGCAAATATCTTACTCACAGAGGATTACGAGCCACAGATTTGTGATTATGGACTAGCAAAATGGCTCCCTGAGAACTGGACTCACCACACCGTTTCAAAGTTCGAAGGAACCTTTGGTTATCTTGCTCCTGAGTACTTGCTTCATGGCATAGTAGACGAGAAAACAGATGTATTTGCTTTTGGTGTTCTGTTACTGGAACTGGTCACTGGCAGGCGAGCCCTTGATTATTCACAGCAAAGCCTTGTCTTGTGGGCAAAACCATTGTTGAAAAAGAACAGAATCAGGGAGTTGGTTGATCCATCGCTAGGTGATGCGTTCGATTGTCGGCAGATGAATCTCGTCCTATTGGTCGCTTCTTTGTGTATACACCGGTCTTCGATTCGCAGACCCACCATGAGACAGATTGTGCAGCTTCTGAGTGGCAATCTGAGCTGCTTCAAGAGCATGAAGAAAAGTCGACTGCCATTTTTCCGAAAGCTATTCCAAGAAGAGCTTCTTGACCCTGAATAA 1341 0.4452 MNTCHKFGGRTRKFFAISLCARRWRCVGLELRSGEMKEKADSPVGVLEDYFRSSESDTSSPKEPTIDSEAQDKSKFASKWRGFLQNLTNRSKKPAPTMHPPLSVLKLSKRMSRSMRETIFPSSRLGADSSLHNSPWKIFTHKEILLATSSFSQENLIGKGGYAEVYKGCLPNGQLVAIKKLTRGSQDEIIGDFLSELGIMAHVNHPNTAKLVGYGVEGGMHLVLELSEKGSLASVLHGSKENLPWCIRYSIALGTAKGILYLHEGCQRRIIHRDIKAANILLTEDYEPQICDYGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVTGRRALDYSQQSLVLWAKPLLKKNRIRELVDPSLGDAFDCRQMNLVLLVASLCIHRSSIRRPTMRQIVQLLSGNLSCFKSMKKSRLPFFRKLFQEELLDPE 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4676g00001 446 Gene3D Transferase(Phosphotransferase) domain 1 228 430 - -
Pral4676g00001 446 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 228 430 - -
Pral4676g00001 446 MobiDBLite consensus disorder prediction 53 72 - -
Pral4676g00001 446 PANTHER OS08G0249100 PROTEIN 35 434 IPR046958 -
Pral4676g00001 446 Gene3D Phosphorylase Kinase; domain 1 114 225 - -
Pral4676g00001 446 SMART serkin_6 151 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4676g00001 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Pral4676g00001 446 Pfam Protein kinase domain 152 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4676g00001 446 ProSitePatterns Protein kinases ATP-binding region signature. 157 180 IPR017441 GO:0005524
Pral4676g00001 446 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 122 225 - -
Pral4676g00001 446 SUPERFAMILY Protein kinase-like (PK-like) 136 433 IPR011009 -
Pral4676g00001 446 ProSiteProfiles Protein kinase domain profile. 151 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4676g00001 Pral-Chr4676 491 3244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4676g00001 138 412 Trihelix Transcription Factor Family AT1G68690 40.909 5.73e-66 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pral4676g00001 Pkinase 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4676g00001 - - gmx:100780587 658.292