Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4675g00008 ATGTCTCCCTTCTTCTTCTTTTTCTTTGTTTCCCTCGCCTTCCCACTTTCTTCCCTCTCTGCAAACGACACCGCTCTTAATGCTCCCTGCCCTCTTAACTTCACCGTCCTCAATGTTGTCGCCGGCGGTGACCAGCCCTCTCTCGACTCCAGCACTTCCTGCGATTTCTCCCGCTCCGCCATCCATCTCGTTCAGTCCGATTACCTCCGTCGCACCGGCTTCTTCCTCCCGCCTCTCAACTCTTCCGAGACCTGCTGGGATAATTTCCAGAAGTTCATCAATCAATACATTCCCAACTTCAACGTTCGAACCGCTTGTGGCTTCCAAACAACCTGGATCTCCCAGGGATGCCAGAACATCACCACTAAAGACTTCGTGTCTCGGGTTCCCGCCTCGGTTATTCAGGATGTCGGGCGGAATTGCAATCAGTCCCTCGAAAATAACTCCCCCTGCGCCCTCTGTACTACGAGCTTGTCGAATGTGCAACCTTATGTGAAAGGAAATTCGACCGGGAACGTCTCCGATTGCACGGCCTATCCCCCAATTTACGCCGCCGCTTATGCTAATCAGGCTGGACCCGCCGACAGAGGCACTGCCCAGTGCGTGTTCCTTCTGAGCTTCAAGTCGCCGGCTTCCAAGGGTAATAAACGAACGATTGTTATTGTGGCGGTTGTGATTGTTTGCGTATTGGCTTTGTTGCTGGTGATTGCTGGGTTTTGGCTTCACCGGAGATCGAAGGAGAAGGGCAAGAGGGGTATTAGTAAAACTGAGGTGGTTGTCGTGTCTGGGTTGGATTCTATGAAGGAGAGCACCACTTTGATTAGATTTACATTTGATGACATCAAGAAGGCAACCAGGAACTTCTCTAGGGATAACATAATAGGTAGAGGAGGATATGGAAATGTGTATAAAGGGTTTCTCCCAGATGGAACTGAAGTTGCATTGAAAAGGTTCAAGAACTGTTCTGCTTCCGGAGATGCAAGTTTCACTCATGAAGTTGAGGTCATTGCCAGCGTCAGGCATGTAAATTTAGTTGCTCTGAGAGGTTATTGTACGGCCACAACCAATTTAGAGGGTTACCAGAGGATTATCGTTTGTGATTTGGTGAAGAATGGGAGTCTCCACGATCACTTATTTGCTTCCACAGGAAAGAAACTCAGCTGGCCAGTCCGTCAGCAGATTGCTCTGGGCACTGCAAGGGGATTGGCTTATTTACACTATGGGGCTCAACCTTCCATCATCCATAGGGACATTAAAGCAAGTAATATCCTTCTGGATGAGAAGTTTGAAGCCAAAGTAGCAGATTTTGGACTTGCTAAGTTCAACCCTGAGGGAATGACTCATATGAGCACGCGGGTAGCTGGAACGATGGGCTACGTTGCACCAGAGTATGCATTGTATGGACAGTTAACAGAAAGAAGTGATGTCTTCAGTTACGGTGTTGTTCTTCTTGAGCTTTTGAGCGGGAAGAAGGCTCTTCAGATGAACGAGGATGGCCAACCCTCATCTTTGAGTGACTTGGCCTGGTCATTGGTTAGGGCAGGTAGAACTTTGGATGTCATTGAAGATGGCATGCCAGAACCGGGTTCGCCAGAAGTGCTTGAGAAGTATGTGTTAATAGCTGTTCTTTGTTCACACCCTCAGTTATATGCCAGGCCAACAATGGATCAGGTCGTGAAGATGTTGGAGACTGAGCAATCAGTGCCGTCAATACCAGAACGGCCAATTCCTCTCGTTGCCGGAAGGATTGATATTGAGAGATCTGCGGGCAGCTTTGGCGGCTCTGGTCAGCTCTCTAGTCCAACAGGTTATCGAACATTTGCATATGAAAGTGAATGCCATTCTTCTAATTCAAAAGAGGAAGAAGGAAGTTCTGATTCGAGAATACCGAGTACATAA 1899 0.4824 MSPFFFFFFVSLAFPLSSLSANDTALNAPCPLNFTVLNVVAGGDQPSLDSSTSCDFSRSAIHLVQSDYLRRTGFFLPPLNSSETCWDNFQKFINQYIPNFNVRTACGFQTTWISQGCQNITTKXDFVSRVPASVIQDVGRNCNQSLENNSPCALCTTSLSNVQPYVKGNSTGNVSDCTAYPPIYAAAYANQAGPADRGTAQCVFLLSFKSPASKGNKRTIVIVAVVIVCVLALLLVIAGFWLHRRSKEKGKRGISKTEVVVVSGLDSMKESTTLIRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGFLPDGTEVALKRFKNCSASGDASFTHEVEVIASVRHVNLVALRGYCTATTNLEGYQRIIVCDLVKNGSLHDHLFASTGKKLSWPVRQQIALGTARGLAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGKKALQMNEDGQPSSLSDLAWSLVRAGRTLDVIEDGMPEPGSPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMLETEQSVPSIPERPIPLVAGRIDIERSAGSFGGSGQLSSPTGYRTFAYESECHSSNSKEEEGSSDSRIPST 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4675g00008 633 SMART serkin_6 289 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4675g00008 633 Gene3D Phosphorylase Kinase; domain 1 254 368 - -
Pral4675g00008 633 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
Pral4675g00008 633 Pfam SPARK 27 177 IPR043891 -
Pral4675g00008 633 CDD STKc_IRAK 295 564 - -
Pral4675g00008 633 Gene3D Transferase(Phosphotransferase) domain 1 370 572 - -
Pral4675g00008 633 ProSiteProfiles Protein kinase domain profile. 289 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4675g00008 633 Pfam Protein kinase domain 290 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4675g00008 633 SUPERFAMILY Protein kinase-like (PK-like) 267 564 IPR011009 -
Pral4675g00008 633 MobiDBLite consensus disorder prediction 591 633 - -
Pral4675g00008 633 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 370 571 - -
Pral4675g00008 633 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 250 368 - -
Pral4675g00008 633 MobiDBLite consensus disorder prediction 593 614 - -
Pral4675g00008 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Pral4675g00008 633 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 141 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4675g00008 Pral-Chr4675 48965 51142 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4675g00008 14 619 Receptor kinase-like Gene Family AT2G48010 63.875 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pral4675g00008 Pkinase 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4675g00008 - - gmx:100800760 862.833