Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4674g00021 ATGACCATCTCTACGGTAATCTGCAGACTAACACAACCCTTGCTAAATATTTCTTCTGTAAGCTCAAAAATAAACGTTACCACTCTTCCGCGGCAGAAGGAGAAGGTTGTGTTGGTGATGGGGGCCACCGGCGCCGGAAAGTCCAGGCTCTCCATCGACCTCGCCAGACGTTTTCCTGCGGAGATCATCAACTCTGATAAAATGCAAGTGTACGAAGGACTCGACATAGTGACAAACAAGATCACTGAGAAAGAGCAACGTGGTGTTCCTCACCATTTACTAGGAACGCAGAATCCAAACTCGGAATTCACGGCTACCAATTTCTGTGAGAAGGCCTCACTAACCATTGAGACAATTAGGAGTCGCGGAAAGCTCCCGATCATCGTCGGAGGCTCTATTTCGTTCCTGGAGGCTTTAATCGACGACGACGACGACTATAAATTCCGATCAAGGTACGATTTCTGTTGCCTCTGGGTGGACGTGGGCATGCCCGTTCTTCATTCGTACGTGGCAGAACGGGTGGATGAGATGTTCAAGAAAGGAATGGTGAACGAATTGAGGGCTTTTTTCAATCCAAAAGGGGACTATTCACGAGGAATCAGGAAGGCAATCGGAGTTCCCGAATTTGATGAATATTTTCGGAGGGAAACACAGGCGGATGAGGAAACGAGGCAGAGGTTGTTGGAAGAAGCGCTGAGGGAGATGAAGGACAACACGCAGAAATTGGCGGGAAAACAGCTGGGGAAGATCCAGAGCTTGAGGAACATGAAGAGATGGAAAATACAGCGCGTGGACGCCACATCGGCGTTCCGAAAGCGCGGGGAAGAAGAAGAGGCGAATGAGGAGTGGAGGAAGATGGTGGCGGAGCCAAGCGCGATGATCGTCGCTCAGTTCCTTCTCAACTTGAAAACCACGACGAAGAGTGGCGTGGCAGGAGGGCTGAGATTGCCATCGCTGGAGAGCGCCATTGCTTCGTCTTCTCATCTTCAGCCGCTGGGGGCACACTCGTGTCCTGTGTGA 1020 0.5088 MTISTVICRLTQPLLNISSVSSKINVTTLPRQKEKVVLVMGATGAGKSRLSIDLARRFPAEIINSDKMQVYEGLDIVTNKITEKEQRGVPHHLLGTQNPNSEFTATNFCEKASLTIETIRSRGKLPIIVGGSISFLEALIDDDDDYKFRSRYDFCCLWVDVGMPVLHSYVAERVDEMFKKGMVNELRAFFNPKGDYSRGIRKAIGVPEFDEYFRRETQADEETRQRLLEEALREMKDNTQKLAGKQLGKIQSLRNMKRWKIQRVDATSAFRKRGEEEEANEEWRKMVAEPSAMIVAQFLLNLKTTTKSGVAGGLRLPSLESAIASSSHLQPLGAHSCPV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4674g00021 339 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 33 299 IPR039657 -
Pral4674g00021 339 FunFam Adenylate isopentenyltransferase 5, chloroplastic 163 261 - -
Pral4674g00021 339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 148 IPR027417 -
Pral4674g00021 339 Gene3D - 33 299 IPR027417 -
Pral4674g00021 339 Coils Coil 218 238 - -
Pral4674g00021 339 Pfam IPP transferase 148 247 - -
Pral4674g00021 339 Pfam IPP transferase 69 142 - -
Pral4674g00021 339 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 163 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4674g00021 Pral-Chr4674 121626 124071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4674g00021 150 309 C2H2 Transcription Factor Family AT2G27760 31.016 4.08e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4674g00021 K10760 - qsa:O6P43_010653 424.476