Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4674g00020 ATGACGCCGTTTACCTCTGGAGGAAGTAGTAACCGTGGGTGTCATTCAGCTGAGGATTTCGCTGCAGTTGGTGCGAAAAATGGGAATAGGAGTCAGGGAACTTGCCTCCCTGAACCATTTCATAATTATGTTGAGTATCTTACAGAAGCCTCGCCATATCTGGCACATACTACGGCAGAATATGCACTTGCGAGCTGTTATCCTCCTGTTGGCAGCTTACCAAATGATACTGGGGTCAATAGAACGGACACAAACTTCTTTTACAATGATCCAGGCTGTTTTAAAGCTATTGATTCTTCTTCTGGGATAGACTTCAGGAAGGTGGGGTTTTGGAGACCAAGTAGTGAAGGCTACCAATCAAAGAAATTTGCAACTAACCAACCCAATCATCTTGCTGAGAGCGAGGCACTGTGGAAGGCAGAATCAACTGGAGATAAACATTCTGCTTCAAAACTTGATCCAAGGGTAACAGTAGGTGAGCTTGGTTTCCTTCCCAAATCACGAAGTAGTTCATCAAAACAGAAAGCCACTGCAGCTGACCGCCAACGCAGGCAACGCATTGCTGATAACCTCAAAGCTTTGCACGACTTGCTACCAGCTCCAGCAGAGGGTTGCTCGGCATATATACTGGATGACGTCATTGACTATGTCAAATATCTGCAGCTTCAGATAAAGGAATTAAGTGGAAGAAGACTGCAAGGTGAATTACCTGCCATGCCACTGACATTCCGTGAGGGCTACGGCCACTATATCAACCAGCAGATGCTAAATGAACCACTTGAGGAGATGATGGGAAAACTAGTTGAGGAAAATCCAGCAGCAGCAGCTCAGCTGTTAGAGAGTAAGGGCCTTTTTCTGTTGCCCTTGTCTTTGGCTGAAGACTTGCGCCAGGCTATGCAGATGTTTGGTGGCATTTCACGAGTCTGA 927 0.4617 MTPFTSGGSSNRGCHSAEDFAAVGAKNGNRSQGTCLPEPFHNYVEYLTEASPYLAHTTAEYALASCYPPVGSLPNDTGVNRTDTNFFYNDPGCFKAIDSSSGIDFRKVGFWRPSSEGYQSKKFATNQPNHLAESEALWKAESTGDKHSASKLDPRVTVGELGFLPKSRSSSSKQKATAADRQRRQRIADNLKALHDLLPAPAEGCSAYILDDVIDYVKYLQLQIKELSGRRLQGELPAMPLTFREGYGHYINQQMLNEPLEEMMGKLVEENPAAAAQLLESKGLFLLPLSLAEDLRQAMQMFGGISRV 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4674g00020 308 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 220 IPR011598 GO:0046983
Pral4674g00020 308 Gene3D - 168 238 IPR036638 GO:0046983
Pral4674g00020 308 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 107 291 - -
Pral4674g00020 308 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 240 IPR036638 GO:0046983
Pral4674g00020 308 CDD bHLH_AtbHLH_like 179 228 IPR045239 -
Pral4674g00020 308 MobiDBLite consensus disorder prediction 163 183 - -
Pral4674g00020 308 Pfam Helix-loop-helix DNA-binding domain 173 221 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4674g00020 Pral-Chr4674 113946 116650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4674g00020 166 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 37.778 2.04e-20 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4674g00020 HLH 1.3e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4674g00020 - - gmx:100788949 305.834