Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4672g00036 ATGGAGGTTCCTGTTTTGAAGGGTGAGGGTTTGGCGCATGAAACAGAGGCATTAAACTCGACAAATCAGGACAATCAGGTGAAGCCTGTTATACAGCACCAAAGGGTCTTCGATTGGGATTCTAATAAAAATGAAAATATCAGGTTAGCCGAAAATGGGAGCAAGAGGAGTAGTTTAAGCTGTGATGATAACGTTGGAGGAGTTGACATTGGAATGGGGTTGAAGAGAAAAGATTATTTGAATGATCAGGTGCAGATTGGTGGTCGAGTATTGTCCTTAGTGTCCGAAGGAGCTGACAACAAGATATCTGATGATGCAGAGGCACTAAACTTGACAGTTGAGAATGAGGATGCGGAGCCAAATGTGCAACAAGAATGTGACTTAGATTGGGATATGATTAAAGGTGGAAGTGTGGGGTTTGTTGATGACGGGAGTAAAATCAGTACTTTAAGCTATGATAATAACATTGGAGGGGTTGACATTGAGGCGGAGGTGATGAGGAAAGTTTATTTAAATGATAAAGTGCAGATTGGTGGTCCACTATTGCACTCAGTGTCAAAGAGAGAAGTCAGTAAAACATCTGATGGAGAGACAACTGAGAATGGGGAAGTGAAGCCGGTCAATCAACAACCACGTGACTTAGATTGGGATGTGAGCAAGAGTGAAAATGTTGAATTGACTAAGGCTAGGATTAAAAGGAATACTTTAGGGTCTGATCATATCTTTGAAGGACTTGATATTGAGATGGATTTGAAGAAGAAAAGTAATTCAATTGATAAAGTGAAGACTAGTGGTCGAGTATTGCGCTCAATGTCAAAGAGAGTAGACAGTAAGATATCTCATGGTGGAGAAGCTGATGTGGTGTTGATTGCAAAAAATGGAGAGAATGACCATGTTTGGTTTGAGAAAAATAAGGTTAAGGTAGAAAAGGAAGAAGGGGGTGATTTTGTTATTAGCAGTTATAATGAGAAGGAAGTTGTTGATGTGAAAATGGATGGCAATAAAAGAAGGAAGTTGAAACGGAAGCGTGGCAGGCCCCCTAAACTGAAGATGGAAGAGCAAGATCAATCAGTTGGTAATATGCAACAGAAATGTGGCAGTCCTCCCAAATTGAAGATGGAAGAGCAAGATCAATTTGTTGGTAACAAGCGACGGAAGCGCGGAAGGCCTCCCAAAGTGAAGATAGAAGAGCAAGATCAACTAGTTGGTAAGATGCAACGGAAGCGTGGAAGGCCCTTCAAAGTGAAAGATCAACTAGTTGGTAATATGCAACGGAAGCGTGGAAGGCCCTTCAAAGTGAAAGATCAACTAGTTGGTAATATACAACGGAAGCGTGGAAGGCCCCCCCAGATGAAGATGGAAGAGCAAGATCAACTAGTTGGCAATATGCAACGGAAGCGTGGACGGCCCCCCAAAATTAAGATGGAGGAGCAAGATCAACTTCCTGGCCAAAAAATGCCATGGAAGCGTGGAAGGCCCCCCAAAAATGGGCAGAAAATTAATCATCTGGAAATAGCACGAAACAGAAAAGGAAAGGCAGGCTTTCAAAAAGGCAAGAAAGGTGTAACTGTGAGAAACGGTACAAATATGAATGCAACTGATGATATGTGCTTGGAAAGGGGATCTTGTGTAAAAGAATCAAAAAAGAGATTTTCTCCTGTTAAGAAAAAAGAATGTGGGAGTCTTTTGAAAACCAAAAATAGTGCATTGACTTCACCATTAATAACATATTCTGCAAATCCTCTCATTAAGAAGAAAGAAGGAATGATTAAAGAGAAGCAGGTGGTGAGGCAACGCATTTTGGAGCTGCTCTTGGCTGCAGGCTGGATTATTGATTACAGACCTAGGAATGGCAAAGAGTATAATGATGCAGTGTATGTTAGTCCCGATGGAAGGACTCACTGGTCTGTTACCTTGGCCTACAAAAGGCTTCGGAAGCATTCTGAAGCTGGTGATGGTGAAGGTAAGGTATACATTCCAGGTTTCAAATTTGTGCCCATACCATTGGAGAAATTCAATATCCTAACTAAGCTTGTTAAAAAGAGAAGGAAAGATAAAGGTAAATTGAAGCAAACAGGAGTAAAAGTGAAGAGAAAAATGTCACTTGTTGAGGAGGACAATTTAGACAATACATCACATAAGAGGTTTCCAGTTCTTGTCAAGGATCGTAAACGGCAGAAAACGCACAATAAGAAGCAAAGTGTCTTTATGGTTCGCAATGCTGAGGAGATAGATTCGGAAACTAATGGATATGTACTTTATGCTGGAAAGCGAACGTTGATTGCTTGGATGATTGATCTGGGGACAGTCCTGCAAAATGAGAAGGTTCACTATGTGAATGACAGAATAAAAGGTGGAAAACTGGAGGGCAGGATCACAAGAGATGGAATTCATTGTGACTGCTGCAATGAAGTCGTAACAATGTCAGAATTTGAAGCCCATGCGGTAAGCAGTTTCGCTGATCCACTCAAAAATATACATATAGAGAGAGGAATTTCCCTTCTGCAATGCCTGCTAGACTCATGGAATAAGCAGAATGAACATGAAAGAAAAGGCTTCCATTTTATTGACACTACAAGTGAAGACCCTAATGATGAAGCATGTGGTGTCTGTGGAGATGGTGGAGACTTGATCTGTTGTGATAAGTGCCCATCAACATTCCATCAAAGCTGCCTAAATATTAAAGAGTTCCCACCTGGCAACTGGCGCTGCATTTATTGTTGTTGCAAATTTTGTGAGCTGGTTGATGGAAGTACAAATGAAAGAACTGGCCATGATGACTTTACTACATCTGCTTTGCTTAGATGCCGTTTATGCGATCAAAAATATCATAGATCTTGTGTCGAGGTAAATGGTATCCAAGCTGATGACTCTAATTTTGCATTCTATTGTGGATACAGATGTGAGGAGTTATCCAAGGGACTTGAAATGCTTCTTGGGGTCAAACATGACATTGAAGATGGACTTTCTTGGACTTTCATTCGCCGGTCAGATGTTGGCTATGATGCTTCACAGATTGAATCCCAGATGGTTGAATGCAATTCCAAGCTGGCTGTTGCATTATCTGTAATGGATGAGTGCTTCATGCCATATATTGATCATAGAACTGGGATTAATCTCATCCACAGTATTCTTTATAATTGTGGTTCAAACTTCAATCGCCTGAGCTATACTGGTTTTATTACTGCTATCTTGGAGAGAGGCGATGAGATCATTGGTGCAGCATCTATTAGGTTTCGAGGGAACCAACTAGCAGAAATGCCATTCATTGGGACCCGCTATATGTATAGGCGTCAAGGAATGTGCCGTCGGCTTCTGGGTGCCATTGAATCGGCACTTGGCTCTTTGAATGTTGAGTTATTGATCATACCAGCAGTCTCAGAAGTCAGAGATACTTGGACTTCTGTTTTTGGGTTTGAGCCGCTTGAAGTGACCAGGAAACAAATGATAAAGAATTTCAGTCTGTTGGTATTCCCTCATGTAGATATGTTAATGAAAGAGATAAAGAAGCCTAAAGTTGCTGATGAAAATCTGATTCCTATAGAAGTTTCGAATCCCGAAATTCAGAAGAATCAAAGTGCATTGGAGGAAGCAACTGCCTGTGATGAGCCAAGTTCATCTGGGTCTGATTTGATCATTTCTGCTGGGAGTGGGATCCCTGCGTTGGATATATGCCCAGTGAATGATAGACATGTGTCAGTCGTATCTGGTTCTCCTCATGGCTTATTGGATAACCCACATCACATTACTAGTGAGTCTGTAAATCCTGATCCGAGTCCACAAGATGTAAAATGTGAAGTTGGATGCCCTGCTGTCGGTGATAGTTTGACAGTGGAAGGCATGACTGCTTTAAAGGCACATGATTATGTTAGTGCTGCTCATGTACAAGCTGAAGAGATAATCAATCGTGACTGCGTTCAATCGGATCCCCTAGAATCGAAAGAAATAAATTCTGAATCTATCAATGGCTGCGTGTCTCAGCAGAGACCCGGTGGTTATTGTGCCGTGATGAAGTGA 4017 0.4147 MEVPVLKGEGLAHETEALNSTNQDNQVKPVIQHQRVFDWDSNKNENIRLAENGSKRSSLSCDDNVGGVDIGMGLKRKDYLNDQVQIGGRVLSLVSEGADNKISDDAEALNLTVENEDAEPNVQQECDLDWDMIKGGSVGFVDDGSKISTLSYDNNIGGVDIEAEVMRKVYLNDKVQIGGPLLHSVSKREVSKTSDGETTENGEVKPVNQQPRDLDWDVSKSENVELTKARIKRNTLGSDHIFEGLDIEMDLKKKSNSIDKVKTSGRVLRSMSKRVDSKISHGGEADVVLIAKNGENDHVWFEKNKVKVEKEEGGDFVISSYNEKEVVDVKMDGNKRRKLKRKRGRPPKLKMEEQDQSVGNMQQKCGSPPKLKMEEQDQFVGNKRRKRGRPPKVKIEEQDQLVGKMQRKRGRPFKVKDQLVGNMQRKRGRPFKVKDQLVGNIQRKRGRPPQMKMEEQDQLVGNMQRKRGRPPKIKMEEQDQLPGQKMPWKRGRPPKNGQKINHLEIARNRKGKAGFQKGKKGVTVRNGTNMNATDDMCLERGSCVKESKKRFSPVKKKECGSLLKTKNSALTSPLITYSANPLIKKKEGMIKEKQVVRQRILELLLAAGWIIDYRPRNGKEYNDAVYVSPDGRTHWSVTLAYKRLRKHSEAGDGEGKVYIPGFKFVPIPLEKFNILTKLVKKRRKDKGKLKQTGVKVKRKMSLVEEDNLDNTSHKRFPVLVKDRKRQKTHNKKQSVFMVRNAEEIDSETNGYVLYAGKRTLIAWMIDLGTVLQNEKVHYVNDRIKGGKLEGRITRDGIHCDCCNEVVTMSEFEAHAVSSFADPLKNIHIERGISLLQCLLDSWNKQNEHERKGFHFIDTTSEDPNDEACGVCGDGGDLICCDKCPSTFHQSCLNIKEFPPGNWRCIYCCCKFCELVDGSTNERTGHDDFTTSALLRCRLCDQKYHRSCVEVNGIQADDSNFAFYCGYRCEELSKGLEMLLGVKHDIEDGLSWTFIRRSDVGYDASQIESQMVECNSKLAVALSVMDECFMPYIDHRTGINLIHSILYNCGSNFNRLSYTGFITAILERGDEIIGAASIRFRGNQLAEMPFIGTRYMYRRQGMCRRLLGAIESALGSLNVELLIIPAVSEVRDTWTSVFGFEPLEVTRKQMIKNFSLLVFPHVDMLMKEIKKPKVADENLIPIEVSNPEIQKNQSALEEATACDEPSSSGSDLIISAGSGIPALDICPVNDRHVSVVSGSPHGLLDNPHHITSESVNPDPSPQDVKCEVGCPAVGDSLTVEGMTALKAHDYVSAAHVQAEEIINRDCVQSDPLESKEINSESINGCVSQQRPGGYCAVMK 1338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4672g00036 1338 PANTHER PHD FINGER PROTEIN 12 580 1203 IPR042163 GO:0003714|GO:0045892
Pral4672g00036 1338 SMART PHD_3 867 908 IPR001965 -
Pral4672g00036 1338 SMART PHD_3 909 969 IPR001965 -
Pral4672g00036 1338 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1008 1168 IPR000182 GO:0016747
Pral4672g00036 1338 MobiDBLite consensus disorder prediction 464 498 - -
Pral4672g00036 1338 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1057 1152 IPR016181 -
Pral4672g00036 1338 ProSiteProfiles Zinc finger PHD-type profile. 865 910 IPR019787 -
Pral4672g00036 1338 SMART AT_hook_2 487 499 IPR017956 GO:0003677
Pral4672g00036 1338 SMART AT_hook_2 424 436 IPR017956 GO:0003677
Pral4672g00036 1338 SMART AT_hook_2 384 396 IPR017956 GO:0003677
Pral4672g00036 1338 SMART AT_hook_2 406 418 IPR017956 GO:0003677
Pral4672g00036 1338 SMART AT_hook_2 464 476 IPR017956 GO:0003677
Pral4672g00036 1338 SMART AT_hook_2 442 454 IPR017956 GO:0003677
Pral4672g00036 1338 SMART AT_hook_2 340 352 IPR017956 GO:0003677
Pral4672g00036 1338 PRINTS AT-hook-like domain signature 382 393 IPR017956 GO:0003677
Pral4672g00036 1338 PRINTS AT-hook-like domain signature 462 472 IPR017956 GO:0003677
Pral4672g00036 1338 PRINTS AT-hook-like domain signature 340 350 IPR017956 GO:0003677
Pral4672g00036 1338 MobiDBLite consensus disorder prediction 186 210 - -
Pral4672g00036 1338 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 856 932 IPR013083 -
Pral4672g00036 1338 CDD NAT_SF 1064 1123 - -
Pral4672g00036 1338 MobiDBLite consensus disorder prediction 334 393 - -
Pral4672g00036 1338 Pfam Tify domain binding domain 790 839 IPR032308 -
Pral4672g00036 1338 SUPERFAMILY FYVE/PHD zinc finger 859 913 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4672g00036 Pral-Chr4672 217289 225617 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4672g00036 325 1175 PHD Transcription Factor Family AT5G36670 38.436 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4672g00036 - - pcin:129313417 1827.76