Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4672g00035 ATGGAGGTTCCTGTTTTGAAGGGTGAGGGTTTGGCGCATGAAACAGAGGCATTAAACTCGACAAATCAGGACAATCAGGTGAAGCCTGTTATACAGCACCAAAGGGTCTTCGATTGGGATTCTAATAAAAATGAAAATATCAGGTTAGCCGAAAATGGGAGCAAGAGGAGTAGTTTAAGCTGTGATGATAACGTTGGAGGAGTTGACATTGGAATGGGGTTGAAGAGAAAAGATTATTTGAATGATCAGGTGCAGATTGGTGGTCGAGTATTGTCCTTAGTGTCCGAAGGAGCTGACAACAAGATATCTGATGATGCAGAGGCACTAAACTTGACAGTTGAGAATGAGGATGCGGAGCCAAATGTGCAACAAGAATGTGACTTAGATTGGGATATGATTAAAGGTGGAAGTGTGGGGTTTGTTGATGACGGGAGTAAAATCAGTACTTTAAGCTATGATAATAACATTGGAGGGGTTGACATTGAGGCGGAGGTGATGAGGAAAGTTTATTTAAATGATAAAGTGCAGATTGGTGGTCCACTATTGCACTCAGTGTCAAAGAGAGAAGTCAGTAAAACATCTGATGGAGAGACAACTGAGAATGGGGAAGTGAAGCCGGTCAATCAACAACCACGTGACTTAGATTGGGATGTGAGCAAGAGTGAAAATGTTGAATTGACTAAGGCTAGGATTAAAAGGAATACTTTAGGGTCTGATCATATCTTTGAAGGACTTGATATTGAGATGGATTTGAAGAAGAAAAGTAATTCAATTGATAAAGTGAAGACTAGTGGTCGAGTATTGCGCTCAATGTCAAAGAGAGTAGACAGTAAGATATCTCATGGTGGAGAAGCTGATGTGGTGTTGATTGCAAAAAATGGAGAGAATGACCATGTTTGGTTTGAGAAAAATAAGGTTAAGGTAGAAAAGGAAGAAGGGGGTGATTTTGTTATTAGCAGTTATAATGAGAAGGAAGTTGTTGATGTGAAAATGGATGGCAATAAAAGAAGGAAGTTGAAACGGAAGCGTGGCAGGCCCCCTAAACTGAAGATGGAAGAGCAAGATCAATCAGTTGGTAATATGCAACAGAAATGTGGCAGTCCTCCCAAATTGAAGATGGAAGAGCAAGATCAATTTGTTGGTAACAAGCGACGGAAGCGCGGAAGGCCTCCCAAAGTGAAGATAGAAGAGCAAGATCAACTAGTTGGTAAGATGCAACGGAAGCGTGGAAGGCCCTTCAAAGTGAAAGATCAACTAGTTGGTAATATGCAACGGAAGCGTGGAAGGCCCTTCAAAATGAAGATGGAAGAGCAAGATCAACTAGTTGGCAATATGCAACGGAAGCGTGGACGGCCCCCCAAAATTAAGATGGAGGAGCAAGATCAACTTCCTGGCCAAAAAATGCCATGGAAGCGTGGAAGGCCCCCCAAAAATGGGCAGAAAATTAATCATCTGGAAATAGCACGAAACAGAAAAGGAAAGGCAGGCTTTCAAAAAGGCAAGAAAGGTGTAACTGTGAGAAACGGTACAAATATGAATGCAACTGATGATATGTGCTTGGAAAGGGGATCTTGTGTAAAAGAATCAAAAAAGAGATTTTCTCCTGTTAAGAAAAAAGAATGTGGGAGTCTTTTGAAAACCAAAAATAGTGCATTGACTTCACCATTAATAACATATTCTGCAAATCCTCTCATTAAGAAGAAAGAAGGAATGATTAAAGAGAAGCAGGTGGTGAGGCAACGCATTTTGGAGCTGCTCTTGGCTGCAGGCTGGATTATTGATTACAGACCTAGGAATGGCAAAGAGTATAATGATGCAGTGTATGTTAGTCCCGATGGAAGGACTCACTGGTCTGTTACCTTGGCCTACAAAAGGCTTCGGAAGCATTCTGAAGCTGGTGATGGTGAAGGTAAGGTATACATTCCAGGTTTCAAATTTGTGCCCATACCATTGGAGAAATTCAATATCCTAACTAAGCTTGTTAAAAAGAGAAGGAAAGATAAAGGTAAATTGAAGCAAACAGGAGTAAAAGTGAAGAGAAAAATGTCACTTGTTGAGGAGGACAATTTAGACAATACATCACATAAGAGGTTTCCAGTTCTTGTCAAGGATCGTAAACGGCAGAAAACGCACAATAAGAAGCAAAGTGTCTTTATGGTTCGCAATGCTGAGGAGATAGATTCGGAAACTAATGGATATGTACTTTATGCTGGAAAGCGAACGTTGATTGCTTGGATGATTGATCTGGGGACAGTCCTGCAAAATGAGAAGGTTCACTATGTGAATGACAGAATAAAAGGTGGAAAACTGGAGGGCAGGATCACAAGAGATGGAATTCATTGTGACTGCTGCAATGAAGTCGTAACAATGTCAGAATTTGAAGCCCATGCGGTAAGCAGTTTCGCTGATCCACTCAAAAATATACATATAGAGAGAGGAATTTCCCTTCTGCAATGCCTGCTAGACTCATGGAATAAGCAGAATGAACATGAAAGAAAAGGCTTCCATTTTATTGACACTACAAGTGAAGACCCTAATGATGAAGCATGTGGTGTCTGTGGAGATGGTGGAGACTTGATCTGTTGTGATAAGTGCCCATCAACATTCCATCAAAGCTGCCTAAATATTAAAGAGTTCCCACCTGGCAACTGGCGCTGCATTTATTGTTGTTGCAAATTTTGTGAGCTGGTTGATGGAAGTACAAATGAAAGAACTGGCCATGATGACTTTACTACATCTGCTTTGCTTAGATGCCGTTTATGCGATCAAAAATATCATAGATCTTGTGTCGAGGTAAATGGTATCCAAGCTGATGACTCTAATTTTGCATTCTATTGTGGATACAGATGTGAGGAGTTATCCAAGGGACTTGAAATGCTTCTTGGGGTCAAACATGACATTGAAGATGGACTTTCTTGGACTTTCATTCGCCGGTCAGATGTTGGCTATGATGCTTCACAGATTGAATCCCAGATGGTTGAATGCAATTCCAAGCTGGCTGTTGCATTATCTGTAATGGATGAGTGCTTCATGCCATATATTGATCATAGAACTGGGATTAATCTCATCCACAGTATTCTTTATAATTGTGGTTCAAACTTCAATCGCCTGAGCTATACTGGTTTTATTACTGCTATCTTGGAGAGAGGCGATGAGATCATTGGTGCAGCATCTATTAGGTTTCGAGGGAACCAACTAGCAGAAATGCCATTCATTGGGACCCGCTATATGTATAGGCGTCAAGGAATGTGCCGTCGGCTTCTGGGTGCCATTGAATCGGCACTTGGCTCTTTGAATGTTGAGTTATTGATCATACCAGCAGTCTCAGAAGTCAGAGATACTTGGACTTCTGTTTTTGGGTTTGAGCCGCTTGAAGTGACCAGGAAACAAATGATAAAGAATTTCAGTCTGTTGGTATTCCCTCATGTAGATATGTTAATGAAAGAGATAAAGAAGCCTAAAGTTGCTGATGAAAATCTGATTCCTATAGAAGTTTCGAATCCCGAAATTCAGAAGAATCAAAGTGCATTGGAGGAAGCAACTGCCTGTGATGAGCCAAGTTCATCTGGGTCTGATTTGATCATTTCTGCTGGGAGTGGGATCCCTGCGTTGGATATATGCCCAGTGAATGATAGACATGTGTCAGTCGTATCTGGTTCTCCTCATGGCTTATTGGATAACCCACATCACATTACTAGTGAGTCTGTAAATCCTGATCCGAGTCCACAAGATGTAAAATGTGAAGTTGGATGCCCTGCTGTCGGTGATAGTTTGACAGTGGAAGGCATGACTGCTTTAAAGGCACATGATTATGTTAGTGCTGCTCATGTACAAGCTGAAGAGATAATCAATCGTGACTGCGTTCAATCGGATCCCCTAGAATCGAAAGAAATAAATTCTGAATCTATCAATGGCTGCGTGTCTCAGCAGAGACCCGGTGGTTATTGTGCCGTGATGAAGTGA 3963 0.4136 MEVPVLKGEGLAHETEALNSTNQDNQVKPVIQHQRVFDWDSNKNENIRLAENGSKRSSLSCDDNVGGVDIGMGLKRKDYLNDQVQIGGRVLSLVSEGADNKISDDAEALNLTVENEDAEPNVQQECDLDWDMIKGGSVGFVDDGSKISTLSYDNNIGGVDIEAEVMRKVYLNDKVQIGGPLLHSVSKREVSKTSDGETTENGEVKPVNQQPRDLDWDVSKSENVELTKARIKRNTLGSDHIFEGLDIEMDLKKKSNSIDKVKTSGRVLRSMSKRVDSKISHGGEADVVLIAKNGENDHVWFEKNKVKVEKEEGGDFVISSYNEKEVVDVKMDGNKRRKLKRKRGRPPKLKMEEQDQSVGNMQQKCGSPPKLKMEEQDQFVGNKRRKRGRPPKVKIEEQDQLVGKMQRKRGRPFKVKDQLVGNMQRKRGRPFKMKMEEQDQLVGNMQRKRGRPPKIKMEEQDQLPGQKMPWKRGRPPKNGQKINHLEIARNRKGKAGFQKGKKGVTVRNGTNMNATDDMCLERGSCVKESKKRFSPVKKKECGSLLKTKNSALTSPLITYSANPLIKKKEGMIKEKQVVRQRILELLLAAGWIIDYRPRNGKEYNDAVYVSPDGRTHWSVTLAYKRLRKHSEAGDGEGKVYIPGFKFVPIPLEKFNILTKLVKKRRKDKGKLKQTGVKVKRKMSLVEEDNLDNTSHKRFPVLVKDRKRQKTHNKKQSVFMVRNAEEIDSETNGYVLYAGKRTLIAWMIDLGTVLQNEKVHYVNDRIKGGKLEGRITRDGIHCDCCNEVVTMSEFEAHAVSSFADPLKNIHIERGISLLQCLLDSWNKQNEHERKGFHFIDTTSEDPNDEACGVCGDGGDLICCDKCPSTFHQSCLNIKEFPPGNWRCIYCCCKFCELVDGSTNERTGHDDFTTSALLRCRLCDQKYHRSCVEVNGIQADDSNFAFYCGYRCEELSKGLEMLLGVKHDIEDGLSWTFIRRSDVGYDASQIESQMVECNSKLAVALSVMDECFMPYIDHRTGINLIHSILYNCGSNFNRLSYTGFITAILERGDEIIGAASIRFRGNQLAEMPFIGTRYMYRRQGMCRRLLGAIESALGSLNVELLIIPAVSEVRDTWTSVFGFEPLEVTRKQMIKNFSLLVFPHVDMLMKEIKKPKVADENLIPIEVSNPEIQKNQSALEEATACDEPSSSGSDLIISAGSGIPALDICPVNDRHVSVVSGSPHGLLDNPHHITSESVNPDPSPQDVKCEVGCPAVGDSLTVEGMTALKAHDYVSAAHVQAEEIINRDCVQSDPLESKEINSESINGCVSQQRPGGYCAVMK 1320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4672g00035 1320 CDD NAT_SF 1046 1105 - -
Pral4672g00035 1320 Pfam Tify domain binding domain 772 821 IPR032308 -
Pral4672g00035 1320 SMART PHD_3 891 951 IPR001965 -
Pral4672g00035 1320 SMART PHD_3 849 890 IPR001965 -
Pral4672g00035 1320 SMART AT_hook_2 384 396 IPR017956 GO:0003677
Pral4672g00035 1320 SMART AT_hook_2 406 418 IPR017956 GO:0003677
Pral4672g00035 1320 SMART AT_hook_2 424 436 IPR017956 GO:0003677
Pral4672g00035 1320 SMART AT_hook_2 340 352 IPR017956 GO:0003677
Pral4672g00035 1320 SMART AT_hook_2 469 481 IPR017956 GO:0003677
Pral4672g00035 1320 SMART AT_hook_2 446 458 IPR017956 GO:0003677
Pral4672g00035 1320 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 838 914 IPR013083 -
Pral4672g00035 1320 SUPERFAMILY FYVE/PHD zinc finger 841 895 IPR011011 -
Pral4672g00035 1320 PRINTS AT-hook-like domain signature 382 393 IPR017956 GO:0003677
Pral4672g00035 1320 PRINTS AT-hook-like domain signature 444 454 IPR017956 GO:0003677
Pral4672g00035 1320 PRINTS AT-hook-like domain signature 340 350 IPR017956 GO:0003677
Pral4672g00035 1320 PANTHER PHD FINGER PROTEIN 12 570 1185 IPR042163 GO:0003714|GO:0045892
Pral4672g00035 1320 ProSiteProfiles Zinc finger PHD-type profile. 847 892 IPR019787 -
Pral4672g00035 1320 MobiDBLite consensus disorder prediction 186 210 - -
Pral4672g00035 1320 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 990 1150 IPR000182 GO:0016747
Pral4672g00035 1320 MobiDBLite consensus disorder prediction 334 393 - -
Pral4672g00035 1320 MobiDBLite consensus disorder prediction 446 480 - -
Pral4672g00035 1320 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1039 1134 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4672g00035 Pral-Chr4672 217289 225617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4672g00035 325 1157 PHD Transcription Factor Family AT5G36670 38.641 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4672g00035 - - pcin:129313417 1836.23