LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4672g00022	ATGGCCGAGAAATTGAATGGCACCGTAAAGGACGATGCGATAGAAAAACCTGACTCGAAAGAGAAGAGTTTGTGTTCAAACGTGAAGGAAAAGAGTGCTAGCTTCAACGATCGGGGGATATGTGTGAGAGCTGATAAGATTGATTTCAAGGATTGGGATAGTCAGCTGGACAAGCACTTGAATAAAGTTCTGTCGAGAGATGCGACGCGGAAGAAGAAGGAAGACTGGGAAATTGATTCCTCCAAATTGGACATAAGGCGTGCTATAGATCACGGAGCCTATGGAACAGTCTACCGTGGCGTTTATGACGGCCTAGACGTTGCTGTGAAGGTATTTGATTGGAGGGACACCGACACTGACGCAGCGGCCATTCGGGCATCATTTCAGCAAGAAGTTGCTGCTTGGCATAAACTTAATCATCCAAATGTTACAAAGTTTGTTGGAGCCTCCATTGGAAACTCATATGTGAAAATTTCTTCTGAAGATGTATCAAGTGAAGTTTATTCATTTATTCCAGCCCAGGCATGTTGTGTTCTTGAGTTTGTCCCTGGGGGGACGCTAAAGAAGTTTCTGATGGGGAACAGAAGGAAGAAACTTGATTTTGACGTTGCCATTCAACTTGCGTTGGACCTCTCCAGAGGATTGAGTTATCTTCACACTAAAAAGATTGTGCACCGTGATGTGAAGACAGAAAATATTTTGTTGGATGCAAATGGAACTGCAAAAATTGCTGATTTTGGTGTTGCTCGAATTGAGGCACAGAACCCATGTGAAATGACTGGAGGGGTTGGCACCCCTTGGTACATGGCGCCAGAGGTGCTTAATGGTAAGCCTTACAATAAGAAATGTGACGTGTATAGTTTTGGGATTTGCTTGTGGGAGATATATTGCTGTGACTTGCCTTATCCTACTCACAAGATTTCTGATGTATTTACGGGGATTGTCCGACAGAACATGCGACCAGAAATCCCAAGATGTTGCCCAAGTGCACTTGCAAGGATCATGCGAAAATGTTGGGATGAAGACCCAGATAAACGCCCTGAGATGGACGAGGTAGTGAGAATGTTAGAGGCAATAGATACAAGCAAGGGAGGACGCATGATTTCAAAAGACCAATCTAGTTTTTGGTGTTTTTGTCCTGGTGGAGTCCTTTAA	1155	0.4407	MAEKLNGTVKDDAIEKPDSKEKSLCSNVKEKSASFNDRGICVRADKIDFKDWDSQLDKHLNKVLSRDATRKKKEDWEIDSSKLDIRRAIDHGAYGTVYRGVYDGLDVAVKVFDWRDTDTDAAAIRASFQQEVAAWHKLNHPNVTKFVGASIGNSYVKISSEDVSSEVYSFIPAQACCVLEFVPGGTLKKFLMGNRRKKLDFDVAIQLALDLSRGLSYLHTKKIVHRDVKTENILLDANGTAKIADFGVARIEAQNPCEMTGGVGTPWYMAPEVLNGKPYNKKCDVYSFGICLWEIYCCDLPYPTHKISDVFTGIVRQNMRPEIPRCCPSALARIMRKCWDEDPDKRPEMDEVVRMLEAIDTSKGGRMISKDQSSFWCFCPGGVL	384

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4672g00022	384	SUPERFAMILY	Protein kinase-like (PK-like)	66	356	IPR011009	-
	Pral4672g00022	384	FunFam	Kinase suppressor of Ras 1	72	163	-	-
	Pral4672g00022	384	ProSiteProfiles	Protein kinase domain profile.	83	359	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4672g00022	384	Gene3D	Transferase(Phosphotransferase) domain 1	184	374	-	-
	Pral4672g00022	384	PRINTS	Tyrosine kinase catalytic domain signature	217	235	IPR001245	GO:0004672\|GO:0006468
	Pral4672g00022	384	PRINTS	Tyrosine kinase catalytic domain signature	179	192	IPR001245	GO:0004672\|GO:0006468
	Pral4672g00022	384	PRINTS	Tyrosine kinase catalytic domain signature	283	305	IPR001245	GO:0004672\|GO:0006468
	Pral4672g00022	384	PRINTS	Tyrosine kinase catalytic domain signature	327	349	IPR001245	GO:0004672\|GO:0006468
	Pral4672g00022	384	Gene3D	Phosphorylase Kinase; domain 1	69	160	-	-
	Pral4672g00022	384	CDD	STKc_MAP3K-like	89	356	-	-
	Pral4672g00022	384	SMART	serkin_6	83	359	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4672g00022	384	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	64	361	-	-
	Pral4672g00022	384	Pfam	Protein tyrosine and serine/threonine kinase	84	356	IPR001245	GO:0004672\|GO:0006468
	Pral4672g00022	384	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	223	235	IPR008271	GO:0004672\|GO:0006468
	Pral4672g00022	384	MobiDBLite	consensus disorder prediction	1	25	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4672g00022	Pral-Chr4672	135749	138503	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4672g00022	14	379	MAP Kinase Kinase Kinase	AT3G22750	59.467	2.87e-164	463

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Pral4672g00022		PK_Tyr_Ser-Thr	8.3e-59	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4672g00022	-		-	qsa:O6P43_006999	511.916