Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4672g00016 ATGGAGCAGTATGAAATTCTAGAACAGATTGGCAAAGGTTCCTTTGGTTCTGCTCTGCTTGTGAGGCACAAGCATGAAAGGAAAAAGTATGTCCTCAAGAAGATCCGCCTTGCTCGTCAAACTGATAGAACCCGTAGATCTGCCCACCAGGAGATGGAGCTTATCTCTAGAGTACGAAATCCCTTCATAGTTGAATATAAAGATTCCTGGGTAGAAAAGGGCTGTTTCGTGTGCATTGTCATAGGCTATTGTGAAGGTGGAGACATGGCAGAAGCTATTAAGAAGGCTAGTGGTGTTCATTTTCCGGAAGAGAAACTTTGTAAATGGCTTGTTCAACTCTTGATGGCCCTTGATTACTTGCATGCAAACCATATCCTTCATCGTGATGTTAAGTGCTCTAATATATTCTTGACAAAAGATCAAGACATACGGCTAGGTGATTTTGGTCTGGCTAAATTACTAACATCTGATGATCTTGCTTCATCTGTTGTTGGCACTCCGAGTTACATGTGTCCTGAGCTTCTTGCTGATATACCTTATGGTTCTAAGTCAGATATCTGGTCGTTGGGCTGCTGCGTATATGAAATGTCTGCCCACAAGCCAGCTTTTAAAGCTTTTGATATGCAAGCATTAATTAACAAAATAAACAAGTCAATTGTGGCTCCTCTGCCAACCATGTATTCTGGCGCTTTTCGAGGGCTTGTCAAAAGTATGCTACGGAAAAATCCAGAGCTTAGACCAAGTGCTTCAGAGTTGCTAAATCATCCGCATCTTCAGCCCTACATTCTTAAAATTCACCTAAAACTAAACAGCCCCAGAAGAAGTACTTTTCCATTCCAGTGGCGTGAGACGAACTACGTAAGGAGAACACGGTTTGTGGAGCCAGACTCTGTTTCTACCCTTTCTGATAGAGATAAACGATTGTCATTTAGCAATGACAGGGCCTTGAATCCTAGTATTTCTGGAACTGAAAAAGATTCTCAGGGTTCAACTCAAAATGGTCATCGATTTTCCACTCATTCAAGGGAGAAACTGTATGAACTGTCTGTTGGTCGCGCCCGTGAAGAATGCATAGCTAACAAGTCAAAAGCCACAAAGTTCTCGACCATTGATGGCAATACTCCAAGATTGAGAACAGCTAAGGATTCTGCCACCCCCAGAAGGCAGTTAACCCCATCAAAAATATTTCATGCTGGTTCAAAGCGTGATTCACTTCCGGTGTCTCATGCTCCAGCAGGAAATTCTTCTCCACCATCACGTAGAGCATCTCTTCCGCTGCGTACAAGAGTCATGACCACAGAAACCTCTTACAGAGCCAAAGTTGGTCTCCTCCGGAGTGTGGAGTCTCCAGATGTTTCTGTTAATGCTCCCCGAATTGACAGGATTGCTGAATTCCCTCTTGCATCTTCTGAGGAAACTATCTTCGCTGTCCCCAGCAGGTCATCAGCATCTGTCATTTGCTCTTCTAGTTCACCAGTTGGTGCTGTTTGTTCAATCACAAAGGACAAGTGTACTGTTCAGGTTGTGGACAAAGCCATGGCAGCCCCTGCCAGCGTGAGTGATACTTGTCCTGAAGCTTCAGGTCCAGGATATGGAAGTGAATGCTCTGAGCATGTCACGGCTGATGTTTCAAGTCGTTCATCTGCAGAGTCACGACAGCGTCGGTTTGACACCTCGTCTTACCAGCAACGTGCTGAGGCATTGGAGGGGTTGCTTGAGTTCAGTGCGAGACTCCTACAACAACAGAGGTTTGATGAACTTGGAGTGTTGTTGAAGCCATTTGGACCTGAGAAGGTTTCTCCAAGAGAGACAGCTATTTGGTTGACGAAGAGTTTTAAAGAAACTGTGGTCTAA 1854 0.445 MEQYEILEQIGKGSFGSALLVRHKHERKKYVLKKIRLARQTDRTRRSAHQEMELISRVRNPFIVEYKDSWVEKGCFVCIVIGYCEGGDMAEAIKKASGVHFPEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKLLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAHKPAFKAFDMQALINKINKSIVAPLPTMYSGAFRGLVKSMLRKNPELRPSASELLNHPHLQPYILKIHLKLNSPRRSTFPFQWRETNYVRRTRFVEPDSVSTLSDRDKRLSFSNDRALNPSISGTEKDSQGSTQNGHRFSTHSREKLYELSVGRAREECIANKSKATKFSTIDGNTPRLRTAKDSATPRRQLTPSKIFHAGSKRDSLPVSHAPAGNSSPPSRRASLPLRTRVMTTETSYRAKVGLLRSVESPDVSVNAPRIDRIAEFPLASSEETIFAVPSRSSASVICSSSSPVGAVCSITKDKCTVQVVDKAMAAPASVSDTCPEASGPGYGSECSEHVTADVSSRSSAESRQRRFDTSSYQQRAEALEGLLEFSARLLQQQRFDELGVLLKPFGPEKVSPRETAIWLTKSFKETVV 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4672g00016 617 FunFam Serine/threonine-protein kinase Nek3 86 332 - -
Pral4672g00016 617 MobiDBLite consensus disorder prediction 312 336 - -
Pral4672g00016 617 MobiDBLite consensus disorder prediction 309 343 - -
Pral4672g00016 617 Gene3D Transferase(Phosphotransferase) domain 1 84 271 - -
Pral4672g00016 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Pral4672g00016 617 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Pral4672g00016 617 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4672g00016 617 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 573 - -
Pral4672g00016 617 SUPERFAMILY Protein kinase-like (PK-like) 1 318 IPR011009 -
Pral4672g00016 617 MobiDBLite consensus disorder prediction 368 422 - -
Pral4672g00016 617 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Pral4672g00016 617 MobiDBLite consensus disorder prediction 368 390 - -
Pral4672g00016 617 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pral4672g00016 617 CDD STKc_Nek 3 258 - -
Pral4672g00016 617 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4672g00016 617 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4672g00016 Pral-Chr4672 101699 107591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4672g00016 10 259 MAP Kinase Kinase Kinase AT1G53570 31.373 3.64e-37 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Pral4672g00016 Pkinase 6.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4672g00016 K08857 - gmx:100810347 962.985