Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4671g00024 | ATGGGTAACTGCCTAGATTCTTCTGCCAAAGTAGATGCAGCTCAAAGTTCCCGAGCTTCTGGATCTGGAATTTCCAAAACTAGCCCTTCATCTGCACCTTCCACCTTATCAATTCCATCGTGCAGTGAAAGAAGCAATGCCTCAAGTCTTCCCACACCAAGGTCTGAGGGTGAAATCTTGTCTTCTCCGAACCTAAAGGCTTTTACATTCAACGACCTGAAGAATGCCACCAGAAATTTTCGTCCTGATAGTCTTCTTGGTGAAGGGGGATTTGGCTATGTTTACAAGGGTTGGATTGATGAAAACACGTTCCAGGCTGCAAGACCTGGATTAGGGATGGTTGTTGCTGTGAAAAGGCTAAAACCTGAGGGCAGCTTTCAAGGTCACAAGGAGTGGTTGACTGAAGTTAACTACCTTGGGCAACTCCACCATGTAAATCTGGTTAAACTAATTGGGTACTGCTTGGAGGGAGAGAACCGGTTATTGGTCTATGAGTTTATGCCCAAAGGGAGCTTAGAAAATCATCTATTTAGGAGAGGGCCACAGCCACTCTCTTGGTCAGTGAGGATGAAAGTGGCCATTGGGGCTGCCAGAGGGCTCTCTTTTCTCCACAATGCCAAATCACAAGTCATATACCGTGATTTTAAAGCTTCCAATATCCTGCTAGATGCGGACTTCAATGCTAAACTCTCTGATTTTGGCCTAGCTAAGGCAGGTCCTACTGGTGATAAAACTCATGTATCTACTCAAGTTATGGGTACTCATGGATATGCAGCTCCTGAATATGTTGCGACAGGTCGGTTGACAGCCAAGAGTGATGTCTATAGCTTTGGGGTTGTGTTGCTTGAACTTCTATCTGGACGGCGTGCAGTTGATAAATCAAAAGCTGGTGTGGAGCTAAATCTGGTAGATTGGGCAAAACCATATTTGGGTGACAAACGAAAACTTTTCCGGATTATGGACACCAAGTTGGAGGGCCAATACCCTCAAAAAGGAGCCTGCACGGCTGCAAATCTTGCTCTACAATGCTTGAATAGTGAAGCCAAGTCAAGGCCTCCGATGACTGAGGTCTTAGCAACACTTGAACAGATTGAAGCCTCCAAGAATGCCGGCCGACGCTCCCATTCAGGGCCACAGAGAGCCCATGTTCCTATAAGGGGTTCTCCTGCACGAACCAGGTCCCCACTACATTTAACTCCAACTGCATCCCCTTTGCCAGCTCACCGGCAATCTGCTCGTGTACACTGA | 1248 | 0.4688 | MGNCLDSSAKVDAAQSSRASGSGISKTSPSSAPSTLSIPSCSERSNASSLPTPRSEGEILSSPNLKAFTFNDLKNATRNFRPDSLLGEGGFGYVYKGWIDENTFQAARPGLGMVVAVKRLKPEGSFQGHKEWLTEVNYLGQLHHVNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDADFNAKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKAGVELNLVDWAKPYLGDKRKLFRIMDTKLEGQYPQKGACTAANLALQCLNSEAKSRPPMTEVLATLEQIEASKNAGRRSHSGPQRAHVPIRGSPARTRSPLHLTPTASPLPAHRQSARVH | 415 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4671g00024 | 415 | Gene3D | Phosphorylase Kinase; domain 1 | 56 | 166 | - | - | |
Pral4671g00024 | 415 | ProSitePatterns | Protein kinases ATP-binding region signature. | 86 | 118 | IPR017441 | GO:0005524 | |
Pral4671g00024 | 415 | CDD | STKc_IRAK | 86 | 364 | - | - | |
Pral4671g00024 | 415 | FunFam | Serine/threonine-protein kinase BIK1 | 47 | 166 | - | - | |
Pral4671g00024 | 415 | ProSiteProfiles | Protein kinase domain profile. | 80 | 364 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral4671g00024 | 415 | Gene3D | Transferase(Phosphotransferase) domain 1 | 167 | 382 | - | - | |
Pral4671g00024 | 415 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 210 | 222 | IPR008271 | GO:0004672|GO:0006468 | |
Pral4671g00024 | 415 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
Pral4671g00024 | 415 | FunFam | Probable serine/threonine-protein kinase PBL8 | 167 | 380 | - | - | |
Pral4671g00024 | 415 | Pfam | Protein tyrosine and serine/threonine kinase | 84 | 360 | IPR001245 | GO:0004672|GO:0006468 | |
Pral4671g00024 | 415 | PANTHER | OS01G0588500 PROTEIN-RELATED | 42 | 365 | - | - | |
Pral4671g00024 | 415 | MobiDBLite | consensus disorder prediction | 9 | 59 | - | - | |
Pral4671g00024 | 415 | SUPERFAMILY | Protein kinase-like (PK-like) | 57 | 365 | IPR011009 | - | |
Pral4671g00024 | 415 | MobiDBLite | consensus disorder prediction | 368 | 415 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4671g00024 | Pral-Chr4671 | 177918 | 181101 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4671g00024 | 12 | 361 | Glycoside Hydrolase | AT3G07070 | 47.592 | 7.26e-108 | 322 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Pral4671g00024 | PK_Tyr_Ser-Thr | 2.7e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4671g00024 | - | - | gmx:100809778 | 710.679 |