Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4671g00024 ATGGGTAACTGCCTAGATTCTTCTGCCAAAGTAGATGCAGCTCAAAGTTCCCGAGCTTCTGGATCTGGAATTTCCAAAACTAGCCCTTCATCTGCACCTTCCACCTTATCAATTCCATCGTGCAGTGAAAGAAGCAATGCCTCAAGTCTTCCCACACCAAGGTCTGAGGGTGAAATCTTGTCTTCTCCGAACCTAAAGGCTTTTACATTCAACGACCTGAAGAATGCCACCAGAAATTTTCGTCCTGATAGTCTTCTTGGTGAAGGGGGATTTGGCTATGTTTACAAGGGTTGGATTGATGAAAACACGTTCCAGGCTGCAAGACCTGGATTAGGGATGGTTGTTGCTGTGAAAAGGCTAAAACCTGAGGGCAGCTTTCAAGGTCACAAGGAGTGGTTGACTGAAGTTAACTACCTTGGGCAACTCCACCATGTAAATCTGGTTAAACTAATTGGGTACTGCTTGGAGGGAGAGAACCGGTTATTGGTCTATGAGTTTATGCCCAAAGGGAGCTTAGAAAATCATCTATTTAGGAGAGGGCCACAGCCACTCTCTTGGTCAGTGAGGATGAAAGTGGCCATTGGGGCTGCCAGAGGGCTCTCTTTTCTCCACAATGCCAAATCACAAGTCATATACCGTGATTTTAAAGCTTCCAATATCCTGCTAGATGCGGACTTCAATGCTAAACTCTCTGATTTTGGCCTAGCTAAGGCAGGTCCTACTGGTGATAAAACTCATGTATCTACTCAAGTTATGGGTACTCATGGATATGCAGCTCCTGAATATGTTGCGACAGGTCGGTTGACAGCCAAGAGTGATGTCTATAGCTTTGGGGTTGTGTTGCTTGAACTTCTATCTGGACGGCGTGCAGTTGATAAATCAAAAGCTGGTGTGGAGCTAAATCTGGTAGATTGGGCAAAACCATATTTGGGTGACAAACGAAAACTTTTCCGGATTATGGACACCAAGTTGGAGGGCCAATACCCTCAAAAAGGAGCCTGCACGGCTGCAAATCTTGCTCTACAATGCTTGAATAGTGAAGCCAAGTCAAGGCCTCCGATGACTGAGGTCTTAGCAACACTTGAACAGATTGAAGCCTCCAAGAATGCCGGCCGACGCTCCCATTCAGGGCCACAGAGAGCCCATGTTCCTATAAGGGGTTCTCCTGCACGAACCAGGTCCCCACTACATTTAACTCCAACTGCATCCCCTTTGCCAGCTCACCGGCAATCTGCTCGTGTACACTGA 1248 0.4688 MGNCLDSSAKVDAAQSSRASGSGISKTSPSSAPSTLSIPSCSERSNASSLPTPRSEGEILSSPNLKAFTFNDLKNATRNFRPDSLLGEGGFGYVYKGWIDENTFQAARPGLGMVVAVKRLKPEGSFQGHKEWLTEVNYLGQLHHVNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDADFNAKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKAGVELNLVDWAKPYLGDKRKLFRIMDTKLEGQYPQKGACTAANLALQCLNSEAKSRPPMTEVLATLEQIEASKNAGRRSHSGPQRAHVPIRGSPARTRSPLHLTPTASPLPAHRQSARVH 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4671g00024 415 Gene3D Phosphorylase Kinase; domain 1 56 166 - -
Pral4671g00024 415 ProSitePatterns Protein kinases ATP-binding region signature. 86 118 IPR017441 GO:0005524
Pral4671g00024 415 CDD STKc_IRAK 86 364 - -
Pral4671g00024 415 FunFam Serine/threonine-protein kinase BIK1 47 166 - -
Pral4671g00024 415 ProSiteProfiles Protein kinase domain profile. 80 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4671g00024 415 Gene3D Transferase(Phosphotransferase) domain 1 167 382 - -
Pral4671g00024 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Pral4671g00024 415 MobiDBLite consensus disorder prediction 1 59 - -
Pral4671g00024 415 FunFam Probable serine/threonine-protein kinase PBL8 167 380 - -
Pral4671g00024 415 Pfam Protein tyrosine and serine/threonine kinase 84 360 IPR001245 GO:0004672|GO:0006468
Pral4671g00024 415 PANTHER OS01G0588500 PROTEIN-RELATED 42 365 - -
Pral4671g00024 415 MobiDBLite consensus disorder prediction 9 59 - -
Pral4671g00024 415 SUPERFAMILY Protein kinase-like (PK-like) 57 365 IPR011009 -
Pral4671g00024 415 MobiDBLite consensus disorder prediction 368 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4671g00024 Pral-Chr4671 177918 181101 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4671g00024 12 361 Glycoside Hydrolase AT3G07070 47.592 7.26e-108 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral4671g00024 PK_Tyr_Ser-Thr 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4671g00024 - - gmx:100809778 710.679