Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4671g00022 ATGGGGAAGCTGAAGCAGCAGCAGGAGCTGGGTAAGCAAGAAGAATCTCAGAAGAAGGAGCGTCATATTGTGACGTGGACACAAGAGGAAGATGATGTATTGAGGAAGCAGATAAGCATCCATGGAACTGAAAATTGGGCAATTATCGCATCTAACTTCAAAGACAAAACGACAAGACAGTGCAGAAGAAGATGGTACACTTACTTGAACTCTGATTTCAAGAAAGGAGGATGGTCGCCGGAGGAAGACTTGCTCTTATGTGAGGCTCAGAAACTATTTGGCAACAGATGGACTGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAACGCTGTGAAAAACCGTTTCTCCACTCTGTGCAAGAAGAGAGCAAAATTTGAAGCCTTGGCAAAAGAGAATAACACTTCGTTCACTGTTTCAAATAACAAAAGAACTATTTCCCAGCAGGGTGATAACAGAGAGTCAACATCAGAGGCTGCGGCACCTGCTAAGAGGATGAGGAGAGCCCATATCCCTGATGCTACAGAAAAGATCAACTATGGAAACAGATCCCATAAGCAATATGAAGCGACAATAAAACAGCAGCCAAGAGCGCCATTTTCGATTTTGGCTCAGAACTTGTCAGATCAGCATGAAGCCTCCAATGACAAGATCAGCAGAAATGCCTATGATTGCAAGACTCAAGGAACATTTCTTAAAGAGGATGATCCAAAGATAAGCGTGTTGATGGAACAAGCGGAGTTATTAAGTTCACTAGCTCTAAAAGTTAATACAGATGATGTGGACCAGAGTCTTGAAGACGCATGGAAGGTACTTCAAGAGTTTCTGAACCAAACCAAAGAATCAGATATTCTCAAATATAATATTTCGGATTTACAGCTCGTAGATCTTAAATATATGATGGAGGAATTTAAGAGTAGTAATGAGGGAAGCCAGCAATGTTGGAGGCAACCAGAACTATATGAAGACTCTCCAAGCAGTTCTGAATACAGTACAGGATCAACTCTTCTGCCCCACTCAGCAAGTGATAATCTGGAACACTCTCTGCTTCAGGATATGGCAACTGATCTAAAGCCTATCCAACTTGGAGATCAAAAAGGAGTCAGTGAATGTGGGAAAGAGGATCTCTCTTCTGCAACTGTAGGTCAAGATATCTTTCCATCTTGTGAGGAACAGATAAGCAATGATGGCATTGCTTCTACCTCATCAAGCACAGAGTTCAATTCCCCTCTTCAAGTTACCCCTATGTTCAGATCTTTGGCCGCAGGAATTCCCAGCCCACAGTTTTCAGAAAGTGAAAGGAACTTCCTAATGAAAACGCTTGGATTGGAGTCCCCATCCATGAACCCAAGTGCCAACCCATCACAACCACCACCCTGCAAAAGAGCCCTACTACACAGTCTATAA 1407 0.4293 MGKLKQQQELGKQEESQKKERHIVTWTQEEDDVLRKQISIHGTENWAIIASNFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDLLLCEAQKLFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKFEALAKENNTSFTVSNNKRTISQQGDNRESTSEAAAPAKRMRRAHIPDATEKINYGNRSHKQYEATIKQQPRAPFSILAQNLSDQHEASNDKISRNAYDCKTQGTFLKEDDPKISVLMEQAELLSSLALKVNTDDVDQSLEDAWKVLQEFLNQTKESDILKYNISDLQLVDLKYMMEEFKSSNEGSQQCWRQPELYEDSPSSSEYSTGSTLLPHSASDNLEHSLLQDMATDLKPIQLGDQKGVSECGKEDLSSATVGQDIFPSCEEQISNDGIASTSSSTEFNSPLQVTPMFRSLAAGIPSPQFSESERNFLMKTLGLESPSMNPSANPSQPPPCKRALLHSL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4671g00022 468 CDD SANT 78 119 IPR001005 -
Pral4671g00022 468 MobiDBLite consensus disorder prediction 308 335 - -
Pral4671g00022 468 MobiDBLite consensus disorder prediction 142 156 - -
Pral4671g00022 468 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Pral4671g00022 468 MobiDBLite consensus disorder prediction 1 22 - -
Pral4671g00022 468 FunFam Transcription factor MYB124 18 74 - -
Pral4671g00022 468 CDD SANT 25 69 IPR001005 -
Pral4671g00022 468 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 69 IPR017930 -
Pral4671g00022 468 PANTHER MYB PROTEIN-RELATED 25 166 - -
Pral4671g00022 468 SMART sant 74 122 IPR001005 -
Pral4671g00022 468 SMART sant 22 71 IPR001005 -
Pral4671g00022 468 SUPERFAMILY Homeodomain-like 22 116 IPR009057 -
Pral4671g00022 468 Gene3D - 13 74 - -
Pral4671g00022 468 Gene3D - 77 158 - -
Pral4671g00022 468 MobiDBLite consensus disorder prediction 8 22 - -
Pral4671g00022 468 ProSiteProfiles Myb-like domain profile. 26 69 IPR001005 -
Pral4671g00022 468 MobiDBLite consensus disorder prediction 442 468 - -
Pral4671g00022 468 Pfam Myb-like DNA-binding domain 26 85 - -
Pral4671g00022 468 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Pral4671g00022 468 MobiDBLite consensus disorder prediction 142 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4671g00022 Pral-Chr4671 153997 160160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4671g00022 64 468 MYB Transcription Factor Family AT1G14350 52.206 4.15e-137 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4671g00022 Myb_DNA-bind_6 2.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4671g00022 K09422 - gmx:100807667 647.121