Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4671g00008 ATGATCATGGAGGAGGCAGATCATTCTAATGGGATCCGCAGGCCCAATTTCCCGCTGCAACTGTTGGAGAAGAAAAATGGTGAACAGCGACGGGATGACGATGATGATGCAGGCGCTGCAGCAACAGCTGGCTTCGTCGACCCGACCCGACCCAATAGTAACCTGCAGCTCGCCGACCAATCCAAGAAGCCGCCTCCGAAGCGTGCCTCCACTAAGGACAGGCACACGAAGGTGGAAGGTCGGGGCCGTCGGATCCGCATGCCAGCGGCTTGTGCTGCCAGAGTTTTTCAGCTGACCAGGGAGCTCGGCCATAAGTCCGACGGCGAGACCATCGAGTGGCTGCTCCAGCAGGCCGAACCCGCCGTGATCGCTGCCACCGGGACTGGGACCATTCCCGCCAATTTCACTTCGCTTAACATCTCGCTCCGCAGCTCCGGGTCGACCGTGTCGGCGCCGTCACAATACTTCAGGGGTAATAGTTATAGTAATTACTTCAGTCCCAGCTTGTTTTCTTCTTCGTCGTTGCAGTTGAGAAACACGGTCGTGGATGATTCAAGAAGGATCTTGTTTCCCGGTGGCGCCGTTGGGTTTTCTTCTTCCTCCAATTCCTCCGAGAATTCTTCGATGAATAATTTCAGTTCTGCGAGCAATGTGAATGCCATGTTACAACTATCAAAGCAAGAGCTCAGGGAAGAAACCGGCGGCCGCGGAGGCGGCCTTGAATCAACGACAACAGAAACCGAAGGAAGTTTAGGGAAAAATAGACGGTCATCACCAGAACAGGAACCACCACAGAGTCAGATGGGGAGTTATTTGTTACAATCCAGCACAGGCTCAATTCCGTCAAGTCATTCATCAGTTCCCGCGACGTTTTGGATGGTGAGTAGCCCCGCCGGAAACAACCAATCCATAGGCAGCAGTGGCGGCGGCAACGGCGGAAGCAGTAGTGGCGACCCCGTATGGGCAATTCCTTCTGTTGGTAATTATAGTAACATGTATAGAGGAGCCATGTCTGCAGGCAGTGGGATTCATTTTATGAATTTTGGTTCTCCAATGGCTCTGATGGGTGGACAGCAATTAGGTGGTACTGTGATGAATGAAAGCAACCTAGGCATGCTCGCAGCCCTAAATGCATACAGGCAGATTCCGGCGAGCGGCGTTTCAGAGTCTCCGGCCATTACTGGACACGGTGGAGGAGTGGATATGGTATTAGGGTTTGAGAGAAGAAAAGCTTCATCTATTTTAACAACTGCTAGTATTTGCTTTCCTCAAGCTTTGTTTTCTCTTCACAAAGTCATTTAA 1302 0.5184 MIMEEADHSNGIRRPNFPLQLLEKKNGEQRRDDDDDAGAAATAGFVDPTRPNSNLQLADQSKKPPPKRASTKDRHTKVEGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSQYFRGNSYSNYFSPSLFSSSSLQLRNTVVDDSRRILFPGGAVGFSSSSNSSENSSMNNFSSASNVNAMLQLSKQELREETGGRGGGLESTTTETEGSLGKNRRSSPEQEPPQSQMGSYLLQSSTGSIPSSHSSVPATFWMVSSPAGNNQSIGSSGGGNGGSSSGDPVWAIPSVGNYSNMYRGAMSAGSGIHFMNFGSPMALMGGQQLGGTVMNESNLGMLAALNAYRQIPASGVSESPAITGHGGGVDMVLGFERRKASSILTTASICFPQALFSLHKVI 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4671g00008 433 MobiDBLite consensus disorder prediction 238 285 - -
Pral4671g00008 433 Pfam TCP family transcription factor 70 262 IPR017887 -
Pral4671g00008 433 MobiDBLite consensus disorder prediction 229 285 - -
Pral4671g00008 433 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 46 407 IPR005333 GO:0003700
Pral4671g00008 433 MobiDBLite consensus disorder prediction 1 82 - -
Pral4671g00008 433 ProSiteProfiles TCP domain profile. 71 125 IPR017887 -
Pral4671g00008 433 MobiDBLite consensus disorder prediction 24 38 - -
Pral4671g00008 433 MobiDBLite consensus disorder prediction 65 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4671g00008 Pral-Chr4671 38682 40790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4671g00008 61 367 TCP Transcription Factor Family AT3G47620 43.860 9.43e-58 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral4671g00008 TCP 6.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4671g00008 - - qsa:O6P43_025447 399.438