Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral466g00007 ATGGGGTTGGTAAAGTCAGCAATAGGAGACGCCATTCTAACCTCAGTCTGGGTTTTTAGCGTCCCAACTCTCAGAATCCTCACTTCCGAAGTCGCCTCCTTCCTTAACCTCCACCCTTCTTCACTGGCAGGCCTCTTCATCACCACCGTCATCTCCACCATTCTCGTCTTCACTATCAGTCTCATCGGCAGAATCCTCGGCGGCGCTAGCTTCAACCCCTCCACCACCGTCTCCTTTTATGCCGCCGGCCTCCGACCCGACTCCTCTCTGACCTCCATGGCCGTCCGATTTCCTGCTCAGGCAGCAGGTGGTGTCGCCGGAGCTCATGCTATTCTGCACCTGATCCCCACCCAGTACAAATCCATGCTTAAAGGTCCTTACTTGAAGGTGGATTTGCATACTGGGGCCATGGCAGAGGGCGCGCTGACTTTTGCTCTCAACTTGGCTATTCTTATTTTTCTTAAAGGTCCTAAGAACCCTCTTTTGAAGGTGTATTTGGTTTCTGTGACCACGGTCTCTCTTGTTATTCCTGGTTCTGCGTACACAGGACCTTCAATGAACCCAGCTAATGCATTTGGATGGGCTTACATCAATAATAGGCACAACACTTGGGAGCAGTTTTATGTTTATTGGATATGTCCTTTCATTGGGGCTACTCTGGCTGCTTCCGTCTATCGATTTCTCTTTACGTCACCGGCCAAGCGGAAGAAAGCCTGA 717 0.5077 MGLVKSAIGDAILTSVWVFSVPTLRILTSEVASFLNLHPSSLAGLFITTVISTILVFTISLIGRILGGASFNPSTTVSFYAAGLRPDSSLTSMAVRFPAQAAGGVAGAHAILHLIPTQYKSMLKGPYLKVDLHTGAMAEGALTFALNLAILIFLKGPKNPLLKVYLVSVTTVSLVIPGSAYTGPSMNPANAFGWAYINNRHNTWEQFYVYWICPFIGATLAASVYRFLFTSPAKRKKA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral466g00007 238 PANTHER AQUAPORIN SIP1-1 1 237 IPR044222 GO:0015250
Pral466g00007 238 Pfam Major intrinsic protein 5 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral466g00007 238 SUPERFAMILY Aquaporin-like 3 232 IPR023271 -
Pral466g00007 238 Gene3D Glycerol uptake facilitator protein. 2 237 IPR023271 -
Pral466g00007 238 PRINTS Major intrinsic protein family signature 168 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral466g00007 238 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral466g00007 238 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral466g00007 238 PRINTS Major intrinsic protein family signature 208 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral466g00007 Pral-Chr466 36912 37733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral466g00007 1 229 Major Intrinsic Protein MIP AT3G04090 47.826 2.66e-60 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral466g00007 K09875 - qsa:O6P43_000566 354.369