Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00102 ATGGCTACGGAACCTAATGTTTCTGAGAATTCGTCCCCCTCTGAAAACTCGTTCAGATTCAGAGAGCTTTCTGTTTTCTTACCCTTCATCTTAGGCTTCTCCACTGACTCTTCCGGACAACACAGTCAAGACCCAGATCAGGAAACCACAGACTCGGAAAATAGTAATAACCATGGCGAAAGAGTCATCTTGATCAACCCTTTTACGCAAGGCATGGTGGTGATCGACAGTACTTCGAGCCTCGAGACTCTGTTCCACGAAATTGGTATGAAAAATGGGCAACCGCCGGCGTCGAAGGAATCAATAGACGCATTGCCAAGTGTGGAAATCAAAGAAGGAGAAGGCGGCGAGTGTGTAATTTGCTTGGAGGATTGGGAGGTTGGTGGGGTGGCGAAAGAGATGCCTTGTAAGCACAAGTATCATCAGAATTGTATAGAGAAGTGGTTGGGAATTCATGGGTCTTGCCCTGTTTGTAGATACCAGATGCCTGTGGGTGAGAAAGAAGTGGGCAAGAGAGATGAAGAAGAACAAGAAGCAGGAGGCGGAGAGAGAAGGAGGGTTGGCAGAGAAATTTGGGTGAGCTTCTCCTTTAGAAGTGATAATACGAACCAAGCTCCTTCTGATAATTCCAGTGATCCTTCATCAAGTCCAAGAGGTGATTCTGCTGTTGAGAATTAG 678 0.4646 MATEPNVSENSSPSENSFRFRELSVFLPFILGFSTDSSGQHSQDPDQETTDSENSNNHGERVILINPFTQGMVVIDSTSSLETLFHEIGMKNGQPPASKESIDALPSVEIKEGEGGECVICLEDWEVGGVAKEMPCKHKYHQNCIEKWLGIHGSCPVCRYQMPVGEKEVGKRDEEEQEAGGGERRRVGREIWVSFSFRSDNTNQAPSDNSSDPSSSPRGDSAVEN 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00102 225 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 37 163 - -
Pral4667g00102 225 MobiDBLite consensus disorder prediction 197 225 - -
Pral4667g00102 225 MobiDBLite consensus disorder prediction 166 185 - -
Pral4667g00102 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 165 IPR013083 -
Pral4667g00102 225 MobiDBLite consensus disorder prediction 36 58 - -
Pral4667g00102 225 SUPERFAMILY RING/U-box 107 163 - -
Pral4667g00102 225 FunFam E3 ubiquitin-protein ligase RNF181 85 165 - -
Pral4667g00102 225 Pfam Ring finger domain 117 159 IPR001841 -
Pral4667g00102 225 ProSiteProfiles Zinc finger RING-type profile. 118 159 IPR001841 -
Pral4667g00102 225 SMART ring_2 118 158 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00102 Pral-Chr4667 717892 718973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00102 1 197 C3H Transcription Factor Family AT1G26800 49.020 7.38e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00102 - - pcin:129321278 244.588