Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00101 ATGGATCTGCAAAACTCGCAAAATCGAAGTATGCATTTGGTTCTGTCCACTGATGCAAAGCCTAGGCTGAAATGGACTCCTGAGCTTCACCAACGATTTCTTGACGCTATTAATCATCTTGGAGGGGCAAATAAGGCAACACCCAAGAGTCTTTTGAGAGTGATGGGCATTCCAGGGCTTACTTTGTACCACCTGAAGAGCCACTTACAGAAATTCAGGCTTGGAAAAAACCAGCAACTAGATATCTGCTCTGACAATAAACACGAAGACCACCGAGAAATCCAGAGCAGTGTCAGTCATTGCAAAAGAGAAATCTGCGTTGGGACCCATAATCAGATGACTGACTTGCAGATAGCACAGGCTCTTCAAATGCAAATGGAAGTACAGGGGAAACTTTATGAACAACTTGAGGTGCAGAGGCATTTGCAGCTTCGAATTGAAGCCCAAGGGAAGTATTTACAATCGGTGCTCAAGAAAGCGCAGGAAACACTTGTTGCTTATAGTTCTTCTTCCACTTCTAATACACAACTTGCAAAAGCTGAGCTTTCTCGACTAGTGTCCGTGATCAACAATGCTTGTCCAAGTTCTCCGATCTCAGAACTGACAGAAACAAGAGGGCTGAGTTCTAAAGATGGGAAGAGGAAGCAAAGCAGAGGGATTATGTGTTCACTGGAAAGTTCTCTGACATCTTCTGAGAGCTCCAGAATAAAGGAAGACAAGAAGCGGCCTAAGGATGAAACAAGAGACCTTCAAAAATCCAATAGTACTTCTTCAGTTGAACTCCCATTAATCGCCATTCGTTCAGCGGATGAAGCATTAAATGGGGATGCAAGTGATGAATCTAGTGGGAGAAAGAGAAGTGGAGGAGCCAATTATGATGGGGAAACGTGTGCTAACAAGGAGAGAAAAATTGGATTGTCAGAACTGCTTGACTTGAACAGGCAATACCAGAGTGATATTGATTCAAATTCTAAGGTTATTGATTTGAATCAATGTTAA 999 0.4274 MDLQNSQNRSMHLVLSTDAKPRLKWTPELHQRFLDAINHLGGANKATPKSLLRVMGIPGLTLYHLKSHLQKFRLGKNQQLDICSDNKHEDHREIQSSVSHCKREICVGTHNQMTDLQIAQALQMQMEVQGKLYEQLEVQRHLQLRIEAQGKYLQSVLKKAQETLVAYSSSSTSNTQLAKAELSRLVSVINNACPSSPISELTETRGLSSKDGKRKQSRGIMCSLESSLTSSESSRIKEDKKRPKDETRDLQKSNSTSSVELPLIAIRSADEALNGDASDESSGRKRSGGANYDGETCANKERKIGLSELLDLNRQYQSDIDSNSKVIDLNQC 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00101 332 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 252 IPR044848 GO:0003700
Pral4667g00101 332 MobiDBLite consensus disorder prediction 197 257 - -
Pral4667g00101 332 Pfam Myb-like DNA-binding domain 22 71 IPR001005 -
Pral4667g00101 332 MobiDBLite consensus disorder prediction 232 251 - -
Pral4667g00101 332 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Pral4667g00101 332 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Pral4667g00101 332 Pfam MYB-CC type transfactor, LHEQLE motif 116 163 IPR025756 -
Pral4667g00101 332 Gene3D - 19 78 - -
Pral4667g00101 332 MobiDBLite consensus disorder prediction 270 298 - -
Pral4667g00101 332 FunFam Two-component response regulator 16 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00101 Pral-Chr4667 715082 717303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00101 11 293 G2-like Transcription Factor Family AT1G69580 50.165 4.30e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4667g00101 Myb_DNA-binding 2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00101 - - qsa:O6P43_033005 418.698