Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00099 ATGTCGGAGCTTAAAGATCCGGCGATTAAGCTTTTTGGGAGGACGATTTCTCTCCCACTCAACCGCCATGTCTTCTCCTTCAATGATTCCTCTGATGGTCAAACTCGTCCTTCCTTCTCTTCTTCTCCTGGCGAAGTCAGCTCTTCAATACACCACCACCCTCTCCGCCCTCAGGAATTGTCAAGGAATGAACTTACCTCAGTACAAGAAGATGATGCCTCCTATCAGAGCACAGAGGATTTAAAATCTCCCTCAGCATCTTCAGGCGTCCTTGAGGATCCTAAGACTCCCTCTGCAGAAAGAGAGACTTCTTTACTCAAATCTGCTAAAAATGGAGAACAGAGTGAGACAAGCAATTCAGAAGACAAAACTCCGAAAAAACCTGACAAGATACTTCCATGCCCAAGATGCAATAGCATGGACACCAAATTCTGTTATTTTAACAACTACAATGTCAATCAACCCCGTCATTTCTGTAAGAACTGCCAGAGATACTGGACTGCTGGAGGAACCATGAGAAATGTGCCTGTAGGCGCAGGTCGTCGCAAGAACAAAAACTCTTCAGCCTCACAGTATCGTCAAATAATGGTTCCGAAGACCCTTCAGATTGCCAAAGAAAACTCTACCAATGGATTGCACAATGCTGTTTTAGGAAATAGAGCGGCTGTCTTGACCTTTGGAACAGATTCTCCTCTTTGTGATTCCATGGTTTCTGTGTTAAACCTTGCAGAGAATACACAGAATGGTGTTCTAAATGGGTTTCATTTACCCGAGCAAAATAATTTTGTCTCTTATGGTAGAGAAGATAATGGGAATGATCAATCCGTTGGAGCTTCTGGCACAGCTTCAACTTCTTCAGAGAGGAAAAGCAACACTGCTTCACAAGAACCTGTAAATAACATTAGTCATGGTTTCCCTCCTCAATTGCCTTGCTTCCCAGGTTCCTCGTGGCCTTATCAATGGAACTCAGCGCAGTGGAGTTCTCCTGTCCCTCCTCCCGGATTATGTCCTCAAGGCTATCCGGCATCATTCTATCCCAATCCTATTTATTGGGGTTGTACTTTACCAGCTTCATGGAACATACCTTCCATATCTGCACAATCATCTTCTGTTGGCCAATCAGCCCCTAGCTCTGGCCCTAATTCACCGTCTCTGGGAAAACACTCGAGGGAAGGGAACATTATCAATCAAGTCAACTCACCAAAAGAAAATCCTAATATGGAGAGTGGCAATTCAGAAAGCAGTGTCTTGATTCCAAAGACGTTACGAGTTGATGATCCCAATGAAGCTGCAAAGAGTTCTATATGGTCAGCATTAGGGATGAAGGATGAGAAGGCCACTTCCCTGAATGGAGGAGGCCTTTTCAAGGCATTTCCTGCGAAGAGGGATGTCAAGAACCACGTGGTTGAACCATCACTGGTGTTGCAAGCCAACCCGGCGGCTTTATCACGATCTCTTACCTTCCATGAGCAGACTTAA 1479 0.4496 MSELKDPAIKLFGRTISLPLNRHVFSFNDSSDGQTRPSFSSSPGEVSSSIHHHPLRPQELSRNELTSVQEDDASYQSTEDLKSPSASSGVLEDPKTPSAERETSLLKSAKNGEQSETSNSEDKTPKKPDKILPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSASQYRQIMVPKTLQIAKENSTNGLHNAVLGNRAAVLTFGTDSPLCDSMVSVLNLAENTQNGVLNGFHLPEQNNFVSYGREDNGNDQSVGASGTASTSSERKSNTASQEPVNNISHGFPPQLPCFPGSSWPYQWNSAQWSSPVPPPGLCPQGYPASFYPNPIYWGCTLPASWNIPSISAQSSSVGQSAPSSGPNSPSLGKHSREGNIINQVNSPKENPNMESGNSESSVLIPKTLRVDDPNEAAKSSIWSALGMKDEKATSLNGGGLFKAFPAKRDVKNHVVEPSLVLQANPAALSRSLTFHEQT 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00099 492 MobiDBLite consensus disorder prediction 116 130 - -
Pral4667g00099 492 Pfam Dof domain, zinc finger 129 186 IPR003851 GO:0003677|GO:0006355
Pral4667g00099 492 MobiDBLite consensus disorder prediction 29 48 - -
Pral4667g00099 492 MobiDBLite consensus disorder prediction 101 115 - -
Pral4667g00099 492 PANTHER CYCLIC DOF FACTOR 2 1 491 IPR045174 GO:0003700|GO:0006355
Pral4667g00099 492 MobiDBLite consensus disorder prediction 367 414 - -
Pral4667g00099 492 ProSiteProfiles Zinc finger Dof-type profile. 132 186 IPR003851 GO:0003677|GO:0006355
Pral4667g00099 492 MobiDBLite consensus disorder prediction 262 302 - -
Pral4667g00099 492 MobiDBLite consensus disorder prediction 60 92 - -
Pral4667g00099 492 ProSitePatterns Zinc finger Dof-type signature. 134 170 IPR003851 GO:0003677|GO:0006355
Pral4667g00099 492 MobiDBLite consensus disorder prediction 29 133 - -
Pral4667g00099 492 MobiDBLite consensus disorder prediction 262 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00099 Pral-Chr4667 699321 715930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00099 4 490 C2C2-Dof Transcription Factor Family AT5G39660 39.499 8.33e-89 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral4667g00099 zf-Dof 6.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00099 - - zju:107429011 568.155