Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00098 ATGAAGGCAGCTTGGCCGAACTGCCTCGTATATGCTTCACAAGAGCACTCCAATCCTCTTACCTCTTCTGATCTCTCGTCTTCTTCTATGGGGATGGTGTATGCAGACATGGGTTCTCTTTCTCTTTCTTCTTCTTCTTCTGAAATGGGAAATAACAACACTGGGGGCACAACCTGGGGTACTTTTCCCTTTATTAGGGATCGCCTTCCTAACAATAACACTGGTGCCACTGATAATGATAATGATGCTTTGGAGTGTAAAGCTTCTGATTCTAGTACTGATCACGAGAATCTGATAGATCATACCCAAGAAAACCCTAATGAGAATTCTGGTGTCAGTACGGGAAAAGAAGCTGATTCTGGGCAGTCCAAGCTTTGTGCACGAGGCCATTGGAGGCCTGCAGAAGATGCCAAGCTCAAGGAGCTCGTGGCTCTCTATGGCCCTCAGAACTGGAACCTTATAGCAGAAAAATTGGAAGGAAGATCAGGTAAGAGCTGTAGGCTGAGGTGGTTCAACCAGCTGGATCCAAGGATAAACAGGAGAGCATTCACTGAAGAGGAAGAAGATAGGTTAATGCAGGCACACAGGATATATGGGAACAAATGGGCCATGATTGCTAGGCTATTCCCAGGAAGAACTGATAACGCAGTGAAGAATCACTGGCATGTTATAATGGCCAGGAAGTACAGAGAACAATCCAGTGCTTACAGAAGAAGAAGGATAAGCCAAGCAGCTGCAAGTTTCAGAAGATCATCAATGGAGGACCAAAATTCAAGCTTAGCAGCCACATCAAGTAGAGGCAGCTCAGGGACAGAACCCCCACCACCAGCTCCTCAACCTTACTGTCTCGTCCCCAATAACAATAACATAATGGCTAGTTTCCCATATGCTCAGTTCCGTGGAGTTAATGGTGGCGTTGACTATGGCTTCAATGGTTCACCCCACATGACTGGTGGATTAGAAGCATTCTCCAGCACAAGCAAGCAGGCCCCTCATACTCACACCACGTTTTATGCTCATCGTCCATCTTTTGATGTCATCTCAGGTGTTAGAGGCAATGACATGGTGGGAGGGGCTTTCGGCCAGAGTATATATAGGGAAAGCAGACCAAGTGATTATGAACTTCGTTCTCTCAATGGCTTCTTATACCCTCAAGAAGATCGTTTCAACCCATACATGATGCCAACAATGCAACAACCACCGCAGTCAAACTCAAACATGAATCCCACTTTTCACAGCTTCTCATCAAATTCCATGGCTCCAAATGCTTCCTCCGCTGAACCATCATCATCAGAGAGCAGAGATAAAGTATTGGGGCGTCCTTCTACTCCTCCATATATCGACTTTCTCGGGGTAGGAGCCACATAG 1368 0.462 MKAAWPNCLVYASQEHSNPLTSSDLSSSSMGMVYADMGSLSLSSSSSEMGNNNTGGTTWGTFPFIRDRLPNNNTGATDNDNDALECKASDSSTDHENLIDHTQENPNENSGVSTGKEADSGQSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEDRLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRISQAAASFRRSSMEDQNSSLAATSSRGSSGTEPPPPAPQPYCLVPNNNNIMASFPYAQFRGVNGGVDYGFNGSPHMTGGLEAFSSTSKQAPHTHTTFYAHRPSFDVISGVRGNDMVGGAFGQSIYRESRPSDYELRSLNGFLYPQEDRFNPYMMPTMQQPPQSNSNMNPTFHSFSSNSMAPNASSAEPSSSESRDKVLGRPSTPPYIDFLGVGAT 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00098 455 ProSiteProfiles Myb-like domain profile. 175 225 IPR001005 -
Pral4667g00098 455 Pfam Myb-like DNA-binding domain 128 174 IPR001005 -
Pral4667g00098 455 Pfam Myb-like DNA-binding domain 180 223 IPR001005 -
Pral4667g00098 455 SMART sant 179 227 IPR001005 -
Pral4667g00098 455 SMART sant 127 176 IPR001005 -
Pral4667g00098 455 CDD SANT 131 172 IPR001005 -
Pral4667g00098 455 CDD SANT 182 222 IPR001005 -
Pral4667g00098 455 Gene3D - 128 179 - -
Pral4667g00098 455 MobiDBLite consensus disorder prediction 246 270 - -
Pral4667g00098 455 MobiDBLite consensus disorder prediction 103 120 - -
Pral4667g00098 455 MobiDBLite consensus disorder prediction 70 121 - -
Pral4667g00098 455 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 174 IPR017930 -
Pral4667g00098 455 MobiDBLite consensus disorder prediction 395 455 - -
Pral4667g00098 455 PANTHER MYB PROTEIN-RELATED 117 292 - -
Pral4667g00098 455 MobiDBLite consensus disorder prediction 395 437 - -
Pral4667g00098 455 SUPERFAMILY Homeodomain-like 128 221 IPR009057 -
Pral4667g00098 455 Gene3D - 181 253 - -
Pral4667g00098 455 MobiDBLite consensus disorder prediction 246 281 - -
Pral4667g00098 455 MobiDBLite consensus disorder prediction 83 102 - -
Pral4667g00098 455 FunFam MYB transcription factor 181 252 - -
Pral4667g00098 455 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 175 229 IPR017930 -
Pral4667g00098 455 FunFam MYB transcription factor 128 179 - -
Pral4667g00098 455 ProSiteProfiles Myb-like domain profile. 128 174 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00098 Pral-Chr4667 688994 690780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00098 101 240 MYB Transcription Factor Family AT1G69560 75.168 5.07e-76 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4667g00098 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00098 K09422 - gmx:100804537 390.578