Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00094 ATGGGCAGGGTGAAGCTGAAGATAAAGAGGCTGGAGAACATTAATGGCCGTCAGGCGACCTATGCTAAAAGGAGGAATGGAATTATTAAAAAGGCTTCGGAATTATCTATACTGTGCGATATAGATATTATACTTCTCATGTTCTCACCGTCTGGGAAGCCAGCACTATGCGGAGGGAGGCGTAGTAGCATAGAGGAGGTTATTGCAAAGTATGCACAACAAACTCCACAGGAAAGGGCAAAGAGGAAATTGGAGAGTCTTGAAGCACTGAAGAAAACATTTAAGAAGTTAGACCACGATGTAAAGATACAAGAATTTCTGGGTACAAGTGGTCAAACTGCTGAGGACCTAAAGAATAACGCCACATTATTACGAACGAGAATATCTGAAATACATACAAGATTAAGCCATTGGACTGAACTTGATAAAATCAACAATGTGGAACAATTGGAACAGATGGAAAATTCTCTCCGGGAGTCAATTAATCAACTTCGAATGCATAAGGAAAATGTACAAAAGCAAAAACTTGAATCAGTGCGATGCAGTAACCAGTTCAATGAGTTGCACATTCCCTTCAGGATCAGTGCCAATCAACATCTCCAACCTCTATCATGGATTGCCAACAATGACAGCCAACATATGGTTTTACCTGATGATTCAAACTTGCTTCTTCCCAAAGACATAGAGTGTTCTGCAAGCTCCTCTTTCGGGGGTTATGCTAGTTATCTTGGCTCAAGTCCAAAGCCAGATCTTTCTAATTATGGGCAAGAAAATAGTGTCCTCTGTGACATGACAAGCACCGCTTCTCTGAGACTACAATTAGGCGGGCAGTTTCCGTACCTGCCATATAATTTCAATCCACTGCATGACATCAATTTCCAGCCATCTGCTGAGATCAACCCACATGACAACCCCATAGATTATCATCCTAATAAATGCTTTGAAGCTCCTAGACCTGCCTTCGACTCTAACCACAATGGATGGGCTTCTACATCAGGACATTGTGCTGTGACCACCATGTTTGATGAATATCTGTATGCCCAGGTACCACAGCGACACTGA 1062 0.4218 MGRVKLKIKRLENINGRQATYAKRRNGIIKKASELSILCDIDIILLMFSPSGKPALCGGRRSSIEEVIAKYAQQTPQERAKRKLESLEALKKTFKKLDHDVKIQEFLGTSGQTAEDLKNNATLLRTRISEIHTRLSHWTELDKINNVEQLEQMENSLRESINQLRMHKENVQKQKLESVRCSNQFNELHIPFRISANQHLQPLSWIANNDSQHMVLPDDSNLLLPKDIECSASSSFGGYASYLGSSPKPDLSNYGQENSVLCDMTSTASLRLQLGGQFPYLPYNFNPLHDINFQPSAEINPHDNPIDYHPNKCFEAPRPAFDSNHNGWASTSGHCAVTTMFDEYLYAQVPQRH 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00094 353 Coils Coil 77 97 - -
Pral4667g00094 353 SUPERFAMILY SRF-like 2 95 IPR036879 GO:0003677|GO:0046983
Pral4667g00094 353 ProSiteProfiles MADS-box domain profile. 1 53 IPR002100 GO:0003677|GO:0046983
Pral4667g00094 353 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Pral4667g00094 353 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Pral4667g00094 353 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Pral4667g00094 353 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 198 - -
Pral4667g00094 353 FunFam Agamous-like MADS-box protein AGL30 14 96 - -
Pral4667g00094 353 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 54 IPR002100 GO:0003677|GO:0046983
Pral4667g00094 353 CDD MADS 2 54 - -
Pral4667g00094 353 Coils Coil 147 177 - -
Pral4667g00094 353 Gene3D - 15 97 IPR036879 GO:0003677|GO:0046983
Pral4667g00094 353 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00094 Pral-Chr4667 655969 662746 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00094 1 351 Type I MADS-box Gene Family AT2G03060 48.294 4.13e-108 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Pral4667g00094 SRF-TF 4.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00094 - - lang:109356063 501.13