Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00081 ATGACAATAACAAAAATGGAGCAGGATCTCCCTCCTGGCTTCAGGTTTCATCCCACTGATGAAGAACTCATCGTCTATTACCTTTATAACCAGTACAGATCAAAGCCATGCCCTGCTTCTTTCATCCCAGAAGTTGATATCTATAAATTCGATCCTTGGGACTTGCCCGAGAAAGCAGAGTTTGAAGAGAAGGAAAGGTATTTCTTTAGCCCACGAGACAGAAAGTACCCTAATGGAGTGAGACCTAACAGAGCCACTGTGTCTGGGTATTGGAAGGCCACTGGGACGGACAAGGCCATACACAGTGGGTCCAAGCATATTGGGGTGAAGAAAGCTCTGGTTTTCTACAAAGGGAAGCCACCAAAAGGGGTCAAGACTGGTTGGATCATGCATGAGTATCGTCTCGTTGAATCCAGGACTTCATCACAAGCCAGAAACAAGCATGTTGGGTCCATGAGATTGGATGACTGGGTTCTGTGCAGGATCTATAAGAAGAAGAATACGGAGAAGACGACGATGGAGGAGAAAGAGGAATTTCCCGCTACTGAGAATCGTAAAGAAACAGCTACAGGGAATAATTATCAGAAGAATGAGCAAGAAATGATGATGATGATGAAGCTTCTTCCAAGGACCTTTTCGATTGCTCATTTTGTGGGAATGGATAATTACCTGGGTTCATCAGTTTCACAGATATTTCCCGAAGCACGTTACAATTCAACGTTTGATCTTCAAAATAACGCTTCGTCCAATTCTGGAATAGTGGAATCCTTTGTCAAGCCTCAGATATTTCCAGACCATAATTATGCACAAGATTCTACAGGAAGTTTTCAAGTGATGAAACAGAGTGGCGAGCAGCCAATGTTTGTGAACCAAGTGCATGCTGATCTTTGA 891 0.4343 MTITKMEQDLPPGFRFHPTDEELIVYYLYNQYRSKPCPASFIPEVDIYKFDPWDLPEKAEFEEKERYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIHSGSKHIGVKKALVFYKGKPPKGVKTGWIMHEYRLVESRTSSQARNKHVGSMRLDDWVLCRIYKKKNTEKTTMEEKEEFPATENRKETATGNNYQKNEQEMMMMMKLLPRTFSIAHFVGMDNYLGSSVSQIFPEARYNSTFDLQNNASSNSGIVESFVKPQIFPDHNYAQDSTGSFQVMKQSGEQPMFVNQVHADL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00081 296 ProSiteProfiles NAC domain profile. 10 165 IPR003441 GO:0003677|GO:0006355
Pral4667g00081 296 MobiDBLite consensus disorder prediction 170 184 - -
Pral4667g00081 296 FunFam NAC transcription factor 19 169 - -
Pral4667g00081 296 Pfam No apical meristem (NAM) protein 11 135 IPR003441 GO:0003677|GO:0006355
Pral4667g00081 296 SUPERFAMILY NAC domain 4 165 IPR036093 GO:0003677|GO:0006355
Pral4667g00081 296 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 221 - -
Pral4667g00081 296 MobiDBLite consensus disorder prediction 170 193 - -
Pral4667g00081 296 Gene3D NAC domain 19 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00081 Pral-Chr4667 583832 585188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00081 10 231 NAC Transcription Factor Family AT1G69490 67.257 3.65e-104 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4667g00081 NAM 5.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00081 - - gmx:732552 333.569