Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00080 ATGGTGAAGTCATCATCATCGGCCTGCGAGAGACTAGTAGAGTTAAAGAAAGGGCCATGGACTCCTGAAGAAGACCAGAAGCTCATGTCTTACATTCAAAAACATGGCCGTGGAAGCTGGGCTTCCTTGCCTGCTAAAGCTGGACTCAAGAGATGTGGGAAGAGCTGTAGGCTGAGGTGGCATAATTATCTAAGACCTGACATCAAACGAGGTAACTTCAGCTCACAAGAAGATCAAACCATAATTCAACTTCATGCTCTTCTGGGAAACAGATGGTCGGTGATAGCTCATCATTTGCCAAAAAGAACAGACAACGAGATCAAGAACCACTGGAACACCTGCCTTAAGAAGAGGCTCACCAGAATGGGTATTAACCCCACCACCCACAAGGCCATCAACGACGCCGCCAACCTCTGCCATATGGCTCAGTGGGAGACTGCTCGGCTTCAAGCCGAAGCCAGACAAGTCAAAGAATATTCCAAACTTCAGTTTCAGAACCAGCTCGGCTTCTCCTCTTCTTCCCACCATTCTTGGTTGTCCACTCCGAAGCCCTCAACAGAGAACACCCCCAAAAGGCATAGCTTGTACGCTATGATGCTTGTCACCGGCGACCTCGAGTCGTCGGCGTCCACGTTGAGCTTCCCGCACAACGTACCTGCCAACTCCAAATGCATTAATAGTAATATCAATCGAAGTTCACTTCCTTTCTCCTCCTCCACGACCACCGTGGTCGCAAATGACAGTGAAAACAAAGTCCGAAGCTTGGGAGACGAGGACAATATTATGGTGGCCGGAGAAGCACTCAGATCAACAGGGTATGACTGCAATTCCCTGGAAGATCTACATGATGACGATTTGTTGGTGTATGGATTTACTGAGAATTCACCGTTACAACAACAAAACTTGGGAGTGATCTCATCAAGTGTTGGAGATGACTGGGAAGCGATTCGGGGCCTGGCCAATGGTTCGCCACTTGTTTTCCCTGCATTGTGA 993 0.4854 MVKSSSSACERLVELKKGPWTPEEDQKLMSYIQKHGRGSWASLPAKAGLKRCGKSCRLRWHNYLRPDIKRGNFSSQEDQTIIQLHALLGNRWSVIAHHLPKRTDNEIKNHWNTCLKKRLTRMGINPTTHKAINDAANLCHMAQWETARLQAEARQVKEYSKLQFQNQLGFSSSSHHSWLSTPKPSTENTPKRHSLYAMMLVTGDLESSASTLSFPHNVPANSKCINSNINRSSLPFSSSTTTVVANDSENKVRSLGDEDNIMVAGEALRSTGYDCNSLEDLHDDDLLVYGFTENSPLQQQNLGVISSSVGDDWEAIRGLANGSPLVFPAL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00080 330 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Pral4667g00080 330 SMART sant 69 117 IPR001005 -
Pral4667g00080 330 SMART sant 16 66 IPR001005 -
Pral4667g00080 330 Gene3D - 16 69 - -
Pral4667g00080 330 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Pral4667g00080 330 Pfam Myb-like DNA-binding domain 70 114 IPR001005 -
Pral4667g00080 330 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 6 227 - -
Pral4667g00080 330 FunFam MYB-related transcription factor 16 69 - -
Pral4667g00080 330 CDD SANT 19 64 IPR001005 -
Pral4667g00080 330 FunFam MYB transcription factor 71 132 - -
Pral4667g00080 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Pral4667g00080 330 CDD SANT 72 113 IPR001005 -
Pral4667g00080 330 SUPERFAMILY Homeodomain-like 14 111 IPR009057 -
Pral4667g00080 330 MobiDBLite consensus disorder prediction 172 191 - -
Pral4667g00080 330 Gene3D - 72 137 - -
Pral4667g00080 330 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Pral4667g00080 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 64 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00080 Pral-Chr4667 579104 580681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00080 6 214 MYB Transcription Factor Family AT5G15310 56.897 3.55e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4667g00080 Myb_DNA-binding 3.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00080 K09422 - gmx:100799222 286.96