Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00079 ATGGTGAAGTCATCATCGTGTAGCGAGAAACTAGCAGGGTTGAAGAAAGGGCCATGGACTCCCGAGGAAGACCAGAAGCTTATGTCTTATATTCATCTGCACGGCCATGGAAGCTGGTCTTCCTTGCCTGCAAGAGCTGGACTCCGAAGATGTGTGAAGAGCTGCAGACTGAGATGGACTAATTATCTAAGACCTGACATCAAACGAGGCAACTTCAGCTTGCGGGAAGACCAGACCATTATTCAACTTCATGCTCTTCTCGGAAACAAGTGGTCGTTAATAGCACATCACTTGCCGAAGAGAACGGATAACGAGATCAAGAACTATTGGAACACCTGCCTTAAGAAGAAGCTCACCAGAATGGGCATCAACCCCACCACCGACAAGCCCGTAGACGACGCCGCCAACCTCTGCCATATGGCTCAGTGGGAGACTGCTCGGCTCGAAGCCGAAGCCAGGCAAGTCAAAGGCTATTCAAAAATGCAGCTCCAGAACCAGCTCGGCTCCTCCTCCTCCCAGCTTTCACTGACTCGGCTCAATTCATGGTCGTCCGCCATGTCGAATCCCTCAACAGAGAACACCCCCAAAGCGCATAGCATGTACGCCATGATGCTCGCCACCGACGACGTCGAGTCGCCGGCGTCCACGTTGAGCTTCCCGGACACTGTCCCTCCCAACTCCAAATGTACTGATAGTAACAATACATTTGGGCTGATCAATCAGAGTTCATTTCCTTCTTCCTCCACCACCGTCGCAAATGACAGTGGAATCATGAAAGAAGCGAGCGACAGTGAAAACATAGTTGGAGGCTTGGGAGACAAGGACAATGTTATGGTGGCTGTGGAAGCATTTAGATCAACAAGGTATGACTGTAGCTCCATGGAAGGTATCCATAATGATGATCTGTTGGTGTATGGATTTAGTGAGATGTCACCACAACAAAACTTGGATGTTTCAAGTTTTGGAGATGATTGGGAAGCCATTCTTGACCTGGTCCATGGTTAG 1005 0.4955 MVKSSSCSEKLAGLKKGPWTPEEDQKLMSYIHLHGHGSWSSLPARAGLRRCVKSCRLRWTNYLRPDIKRGNFSLREDQTIIQLHALLGNKWSLIAHHLPKRTDNEIKNYWNTCLKKKLTRMGINPTTDKPVDDAANLCHMAQWETARLEAEARQVKGYSKMQLQNQLGSSSSQLSLTRLNSWSSAMSNPSTENTPKAHSMYAMMLATDDVESPASTLSFPDTVPPNSKCTDSNNTFGLINQSSFPSSSTTVANDSGIMKEASDSENIVGGLGDKDNVMVAVEAFRSTRYDCSSMEGIHNDDLLVYGFSEMSPQQNLDVSSFGDDWEAILDLVHG 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00079 334 Gene3D - 71 136 - -
Pral4667g00079 334 FunFam MYB transcription factor 70 131 - -
Pral4667g00079 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Pral4667g00079 334 SMART sant 15 65 IPR001005 -
Pral4667g00079 334 SMART sant 68 116 IPR001005 -
Pral4667g00079 334 CDD SANT 18 63 IPR001005 -
Pral4667g00079 334 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Pral4667g00079 334 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Pral4667g00079 334 CDD SANT 71 112 IPR001005 -
Pral4667g00079 334 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 230 - -
Pral4667g00079 334 FunFam MYB-related transcription factor 15 68 - -
Pral4667g00079 334 Gene3D - 13 69 - -
Pral4667g00079 334 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Pral4667g00079 334 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Pral4667g00079 334 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Pral4667g00079 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00079 Pral-Chr4667 569982 571356 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00079 5 199 MYB Transcription Factor Family AT5G15310 60.766 1.92e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4667g00079 Myb_DNA-binding 2.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00079 K09422 - gmx:100809025 300.441