Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00078 ATGGTGAAGTCATCATCGTGCAGCGAGAAGCTGGGCGAGTTGAAGAAAGGACCATGGACTCCCGAGGAAGACGAGAAGCTCATGTCTTACATTCAACTACACGGCCATGGAAGCTGGTCTTCCTTGCCTGCAAGCGCTGGACTCCGAAGATGTGGGAAGAGTTGCAGACTGAGATGGATTAATTATCTAAGACCTGACATCAAACGAGGCAACTTCAGCTTGCAGGAAGATCAGACCATTATACGACTTCATGCTCTTCTCGGAAACAAATGGTCGGTGATAGCACATCACTTGCCAAAGAGAACAGACAATGAGATCAAGAATTACTGGAACACCCACCTTAAGAAGAGGCTCACCAGAATGGGTATCAATCCCACCACCCTCAAGCCCATAAATGACATCGTCAATGACGCAGCCAACCTCAGCCATATGGCTCAGTGGGAGACTGCTCGGCTGCAAGCCGAAGCCCGGCAACTAAAAGAATATTCGGAACTGCAGCTCCAGAACCAGCTCGACTCCCCCTACTCCTCTTCCCAGCCTCCACTGACTCGGCTCGTCCTCAACAACGTCACACCGCGGCCATCGCCACCTCCCTGCCTCGACGTGCTCAAGGTATGGCAGAATTCTTGGTTGTCCACGTCGAAGCCCTCAACAGAGAACACCCACAGAATGCATAGCATGAATGCCATTGTGCTCGCCACCGACGACCTTGAGTCGCCGGCATCCACGTTGAGCTTCCCGTACGACGTCCCTACCAAATGTCGTAGTAATGGTAATTCTGCCTTAGGGCAGATCAATCAAAGTTTACTTCCAGCTTCATCCTCTACCAGCCCCACCGTCGACGTCGCAAATGAGAGTGAAAACAAAGTGCAAAGCTTGGGAGAGGGGGACAATATTATGTTGGCCGTAGAAGCTTTCAGACCAACAGGTTATAACTGTAAAAATTCCATGGAAGATCTCCGTGATGACGGTGTGTTGGGAGTCTCAAGTGTTGGAGATGACTGGGAAGCCATTCTGGACCTGGTCATCAATAGTTCGCCACCTGTTTTCCCAGTGTTGTGA 1062 0.5075 MVKSSSCSEKLGELKKGPWTPEEDEKLMSYIQLHGHGSWSSLPASAGLRRCGKSCRLRWINYLRPDIKRGNFSLQEDQTIIRLHALLGNKWSVIAHHLPKRTDNEIKNYWNTHLKKRLTRMGINPTTLKPINDIVNDAANLSHMAQWETARLQAEARQLKEYSELQLQNQLDSPYSSSQPPLTRLVLNNVTPRPSPPPCLDVLKVWQNSWLSTSKPSTENTHRMHSMNAIVLATDDLESPASTLSFPYDVPTKCRSNGNSALGQINQSLLPASSSTSPTVDVANESENKVQSLGEGDNIMLAVEAFRPTGYNCKNSMEDLRDDGVLGVSSVGDDWEAILDLVINSSPPVFPVL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00078 353 FunFam MYB transcription factor 71 118 - -
Pral4667g00078 353 FunFam MYB-related transcription factor 15 68 - -
Pral4667g00078 353 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Pral4667g00078 353 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Pral4667g00078 353 MobiDBLite consensus disorder prediction 1 20 - -
Pral4667g00078 353 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Pral4667g00078 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Pral4667g00078 353 Gene3D - 13 69 - -
Pral4667g00078 353 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Pral4667g00078 353 CDD SANT 71 114 IPR001005 -
Pral4667g00078 353 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 256 - -
Pral4667g00078 353 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Pral4667g00078 353 CDD SANT 18 63 IPR001005 -
Pral4667g00078 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 63 IPR017930 -
Pral4667g00078 353 SMART sant 15 65 IPR001005 -
Pral4667g00078 353 SMART sant 68 116 IPR001005 -
Pral4667g00078 353 Gene3D - 70 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00078 Pral-Chr4667 562855 564218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00078 5 180 MYB Transcription Factor Family AT5G15310 68.306 3.97e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4667g00078 Myb_DNA-binding 8.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00078 K09422 - gmx:100799222 343.969