Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00077 ATGGTGAAGCCATCGTCGTGCAGCGAGAAACTAGCAGAGTTGAAGAAAGGGCCATGGACTCCTGAAGAAGATCAGAAGCTCATGTCCTACATTCAACTACACGGCCATGGGAGCTGGTCTTCCTTACCTGCAAAAGCTGGACTCCGGAGGTGTGGGAAGAGCTGCAGACTGAGATGGATTAATTATCTAAGACCTGACATCAAACGAGGCAACTTCAGCTCGCAGGAAGATCAAACCATTATTCAACTTCATGCTCTTCTCGGAAACAAATGGTCGGTGATAGCACATCACTTGCCAAAGAGAACAGACAATGAGATCAAGAATTACTGGAACACCTGCCTGAAAAGGAGGCTCACCAGAATGGGTGTAAACCCAACCACCCACAAGCCCCTGCACGACGTCGTCAAGGACGCTGCCAACCTCAGCCATATGGCTCAGTGGGAGACTGCTCGGCTCGAGGCTGAAGCGAAGCAGCAAATCAAAGAACACCCAAAGATGCAGCTCCAGAACCAGCTCGGCTCCTCCTCCTCCTCCTCCTCCTCCTCCCAGCCTCCACTCACTCGGCTCGTGCTCAACAAGGTCACACCTCGTCCATCGCCACCTCCGTGCCTCGACGTGCTCAAGGCATGGCAGAATTCTTGGTCGTCCACGTCAACTGAGAACACTCCCATAATGCATAGCATGTACGCCATGATGCTCGCCGCCGACGACCTCGAGTCGCCGGCTTCCACTTTGAGCTTCCCGGACTCCGTCCCTACCAACTCCAAACGTACTGATGGTAATACTACCTTTGGGCTGATCAGTCAAAGTTCACTTCCTTCCTCGTCTTCCCCTGTCACAGGCGGCGAAATTATGGCGGCGGTGGAAACATTCAGATCAACAGGGTATGACTGTAATTCCGTGCAGGAAGGTCTTCATCATGACGATGTGTTTGGAGTCTTAAGTGTCGGGAATGGAGGAAGCGACAACTTTGAGGAAGAGACGCAAGATTGGGAAGCCATTCTCGAGTTGGTCAATGGTTTGCCCTCATCAGCACCCTGTTTTCCTGAGCTGTGA 1056 0.5227 MVKPSSCSEKLAELKKGPWTPEEDQKLMSYIQLHGHGSWSSLPAKAGLRRCGKSCRLRWINYLRPDIKRGNFSSQEDQTIIQLHALLGNKWSVIAHHLPKRTDNEIKNYWNTCLKRRLTRMGVNPTTHKPLHDVVKDAANLSHMAQWETARLEAEAKQQIKEHPKMQLQNQLGSSSSSSSSSQPPLTRLVLNKVTPRPSPPPCLDVLKAWQNSWSSTSTENTPIMHSMYAMMLAADDLESPASTLSFPDSVPTNSKRTDGNTTFGLISQSSLPSSSSPVTGGEIMAAVETFRSTGYDCNSVQEGLHHDDVFGVLSVGNGGSDNFEEETQDWEAILELVNGLPSSAPCFPEL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00077 351 Gene3D - 15 68 - -
Pral4667g00077 351 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Pral4667g00077 351 FunFam MYB transcription factor 70 131 - -
Pral4667g00077 351 Gene3D - 70 140 - -
Pral4667g00077 351 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Pral4667g00077 351 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Pral4667g00077 351 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Pral4667g00077 351 FunFam MYB-related transcription factor 15 68 - -
Pral4667g00077 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Pral4667g00077 351 MobiDBLite consensus disorder prediction 165 186 - -
Pral4667g00077 351 SMART sant 15 65 IPR001005 -
Pral4667g00077 351 SMART sant 68 116 IPR001005 -
Pral4667g00077 351 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Pral4667g00077 351 CDD SANT 18 63 IPR001005 -
Pral4667g00077 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Pral4667g00077 351 CDD SANT 71 112 IPR001005 -
Pral4667g00077 351 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00077 Pral-Chr4667 548974 550313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00077 5 184 MYB Transcription Factor Family AT5G15310 65.775 8.63e-80 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4667g00077 Myb_DNA-binding 4.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00077 K09422 - gmx:100799222 343.584