Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00076 ATGGTGAAGTCATCATCGTGCAGCGAGAAACCAGCAGGGTTGAAGAAAGGGCCATGGACTCCGGAGGAAGACCAGAAGCTCATGTCTTACATCCAACTACACGGCCATGGAAGGTGGTCTTCCTTGCCTGCAAAAGCTGGACTCCGGAGGTGTGGGAAGAGCTGCAGACTGAGATGGATTAATTATCTAAGACCTGACATCAAACGAGGCAACTTCAGCTCGCAGGAAGATCAAACCATTATTCAACTTCATGCTCTTCTCGGAAACAAATGGTCGGTGATAGCACATCACTTGCCAAAGAGAACAGACAATGAGATCAAGAATTACTGGAACACCTGCCTGAAAAGGAGGCTCACCAGAATGGGTGTAAACCCAACCACCCACAAGCCCCTGCACGACGTCGTCAAGGACGCTGCCAACCTCAGCCATATGGCTCAGTGGGAGACTGCTCGGCTCGAGGCTGAAGCCAGGCAGCAAACCAAAGAACACCCAAAGATGCAGCTCCAGAACCAGCTCGGCTCCTCCTCCTCCTCCTCCTCCCAGCCTCCACTCACTCGGCTCGTGCTCAACAAGGTCACACCTCGTCCATCGCCACCTCCGTGCCTCGACGTGCTCAAGGCATGGCAGAATTCTTGGTCGTCAACGTCAACTGAGAACACTCCCATAATGCGTAGCATGTACGCCATGATGCTCGCCGCCGACGACCTCGAGTCGCCGGCTTCCACTTTGAGCTTCCCGGACTCCGTCCCTACCAACTCCAAACGTACTGATGGTAATACTACCTTTGGGCTGATCAGTCAAAGTTCACTTCCTTCCTCGTCTTCCCCTGTCACAGGCGGCGAAATTATGGCGGCGGTGGAAACATTCAGATCAACAGGGTATGACTGTAATTCCGTGCAGGAAGGTCTTCATCATGACGATGTGTTTGGAGTCTTAAGTGTCGGGAATGGAGGAAGCGACAACTTTGAGGAAGAGAGGCAAGATTGGGAAGCCATTCTCGAGTTGGTCAATGGTTTGCCCTCATCAGCACCCTGTTTTCCTGAGCTGTGA 1050 0.5267 MVKSSSCSEKPAGLKKGPWTPEEDQKLMSYIQLHGHGRWSSLPAKAGLRRCGKSCRLRWINYLRPDIKRGNFSSQEDQTIIQLHALLGNKWSVIAHHLPKRTDNEIKNYWNTCLKRRLTRMGVNPTTHKPLHDVVKDAANLSHMAQWETARLEAEARQQTKEHPKMQLQNQLGSSSSSSSQPPLTRLVLNKVTPRPSPPPCLDVLKAWQNSWSSTSTENTPIMRSMYAMMLAADDLESPASTLSFPDSVPTNSKRTDGNTTFGLISQSSLPSSSSPVTGGEIMAAVETFRSTGYDCNSVQEGLHHDDVFGVLSVGNGGSDNFEEERQDWEAILELVNGLPSSAPCFPEL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00076 349 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Pral4667g00076 349 FunFam MYB transcription factor 70 131 - -
Pral4667g00076 349 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 209 - -
Pral4667g00076 349 MobiDBLite consensus disorder prediction 163 183 - -
Pral4667g00076 349 SMART sant 68 116 IPR001005 -
Pral4667g00076 349 SMART sant 15 65 IPR001005 -
Pral4667g00076 349 Gene3D - 15 68 - -
Pral4667g00076 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Pral4667g00076 349 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Pral4667g00076 349 MobiDBLite consensus disorder prediction 1 21 - -
Pral4667g00076 349 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Pral4667g00076 349 MobiDBLite consensus disorder prediction 152 183 - -
Pral4667g00076 349 CDD SANT 18 63 IPR001005 -
Pral4667g00076 349 CDD SANT 71 112 IPR001005 -
Pral4667g00076 349 FunFam MYB-related transcription factor 15 68 - -
Pral4667g00076 349 Gene3D - 71 140 - -
Pral4667g00076 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 63 IPR017930 -
Pral4667g00076 349 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Pral4667g00076 349 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00076 Pral-Chr4667 514586 515917 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00076 5 346 MYB Transcription Factor Family AT3G01140 43.817 1.22e-81 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4667g00076 Myb_DNA-binding 3.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00076 K09422 - gmx:100792994 334.339