Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00073 ATGGTGAAGTCATCATCGTGCAGCGAGAAACCAGCAGGGTTGAAGAAAGGGCCATGGACTCCCGAGGAAGACCAGAAGCTCATGTCTTACATTCAACTACACGGCCATGGAAGCTGGTCTTCCTTGCCTGCAAAAGCTGGACTCCGGAGGTGTGGGAAGAGCTGCAGACTGAGATGGATTAATTATCTAAGACCTGACATCAAACGAGGCAACTTCAGCTCGCAGGAAGATCAAACCATTATTCAACTTCATGCCCTTCTCGGAAACAAATGGTCGGTGATAGCACATCACTTGCCAAAGACAACAGACAATGAGATCAAGAATTACTGGAACACCTGCCTGAAAAGGAGGCTCACCAGAATGGGTATAAACCCAACAACCCACAAGCCACTGAACGACGTCGTCAAGGACGCTGCCAACCTCAGCCATATGGCTCAGTGGGAGACTGCTCGGCTCGAGGCTGAAGCCAGGCAGCAAGTCAAAGAACACTCAAAGATGCAGCTCCAGAACCAGCTCGGCTCCTCCTCCTCCTCCCAGCCTCATTCTTGGTCGTCAACGTCAACTGAGAACACTCCCATAATGCGTAGCATGTACGCCATGATGCTCGCCGCCGACGACCTCGAGTCGCCGGCGTCCACTTTGAGCTTCCCGGACACCGTCCCTACCAACTCCAAACGTACTGATGGTAATACTACCTTTGGGCTGATCAGTCAAAGTTCACTTCCTTCCTCGTCTTCCCCTGTCACAGGCGGCGAAATTATGGCGGCGGTGGAAACATTCAGATCAACAGGGTATGACTGTAATTCCGTGCAGGAAGGTCTTCATCATGACGATGTGTTTGGTGTCTTAAGTGTCGGGAATGGAGGAAGCGACAACTTTGAGGAAGAGAGGCAAGATTGGGAAGCCATTCTCGAGTTGGTCAATGGTTTGCCCTTATCAGCACCCTGTTTTCCTGAGCTGTGA 963 0.513 MVKSSSCSEKPAGLKKGPWTPEEDQKLMSYIQLHGHGSWSSLPAKAGLRRCGKSCRLRWINYLRPDIKRGNFSSQEDQTIIQLHALLGNKWSVIAHHLPKTTDNEIKNYWNTCLKRRLTRMGINPTTHKPLNDVVKDAANLSHMAQWETARLEAEARQQVKEHSKMQLQNQLGSSSSSQPHSWSSTSTENTPIMRSMYAMMLAADDLESPASTLSFPDTVPTNSKRTDGNTTFGLISQSSLPSSSSPVTGGEIMAAVETFRSTGYDCNSVQEGLHHDDVFGVLSVGNGGSDNFEEERQDWEAILELVNGLPLSAPCFPEL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00073 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 67 IPR017930 -
Pral4667g00073 320 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 222 - -
Pral4667g00073 320 MobiDBLite consensus disorder prediction 152 189 - -
Pral4667g00073 320 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Pral4667g00073 320 MobiDBLite consensus disorder prediction 1 21 - -
Pral4667g00073 320 SMART sant 15 65 IPR001005 -
Pral4667g00073 320 SMART sant 68 116 IPR001005 -
Pral4667g00073 320 FunFam MYB-related transcription factor 15 68 - -
Pral4667g00073 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 118 IPR017930 -
Pral4667g00073 320 CDD SANT 18 63 IPR001005 -
Pral4667g00073 320 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Pral4667g00073 320 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Pral4667g00073 320 CDD SANT 71 112 IPR001005 -
Pral4667g00073 320 Gene3D - 71 118 - -
Pral4667g00073 320 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Pral4667g00073 320 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Pral4667g00073 320 Gene3D - 15 68 - -
Pral4667g00073 320 MobiDBLite consensus disorder prediction 163 189 - -
Pral4667g00073 320 FunFam MYB transcription factor 70 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00073 Pral-Chr4667 460567 461889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00073 5 220 MYB Transcription Factor Family AT3G01140 59.130 2.05e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4667g00073 Myb_DNA-binding 3.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00073 K09422 - gmx:100809025 300.827