Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00072 ATGGTGAAGTCATCGTCGTGCTGTGAGAAACTAGGAGGGTTAAAGAAAGGACCATGGACTCCTGAAGAAGACCAGAAGCTGGTGGCTTATATTCATCAACGTGGCCAAGGAAGCTGGTCTTCCTTGCCAGCAAAAGCTGGGCTTCGGAGATGTGGGAAGAGCTGCAGATTGAGGTGGACTAATTACTTAAGACCTGATATAAAACGAGGCAAGTTCAGTTTGAAGGAAGATCAAATCATTATTCAACTTCACGCTCTTCTTGGAAACAGGTAA 273 0.4505 MVKSSSCCEKLGGLKKGPWTPEEDQKLVAYIHQRGQGSWSSLPAKAGLRRCGKSCRLRWTNYLRPDIKRGKFSLKEDQIIIQLHALLGNR 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00072 90 SUPERFAMILY Homeodomain-like 17 90 IPR009057 -
Pral4667g00072 90 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Pral4667g00072 90 CDD SANT 18 63 IPR001005 -
Pral4667g00072 90 FunFam MYB-related transcription factor 15 68 - -
Pral4667g00072 90 Gene3D - 13 69 - -
Pral4667g00072 90 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 67 IPR017930 -
Pral4667g00072 90 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Pral4667g00072 90 SMART sant 15 65 IPR001005 -
Pral4667g00072 90 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 90 IPR017930 -
Pral4667g00072 90 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00072 Pral-Chr4667 442080 442799 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00072 5 90 MYB Transcription Factor Family AT5G15310 82.558 3.93e-48 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4667g00072 Myb_DNA-binding 3.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00072 K09422 - psom:113315091 159.073